Paenibacillus taichungensis: ACJYJG_30610
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Entry
ACJYJG_30610 CDS
T11411
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ptac Paenibacillus taichungensis
Pathway
ptac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJYJG_30610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptac03019
]
ACJYJG_30610
03009 Ribosome biogenesis [BR:
ptac03009
]
ACJYJG_30610
Enzymes [BR:
ptac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACJYJG_30610
Messenger RNA biogenesis [BR:
ptac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACJYJG_30610
Ribosome biogenesis [BR:
ptac03009
]
Prokaryotic type
rRNA helicases
ACJYJG_30610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XLM65441
LinkDB
All DBs
Position
6831312..6832757
Genome browser
AA seq
481 aa
AA seq
DB search
MSKQQFKDYGLGEEIVKALDSLGYETPTEVQTKVIPVALENKDLVVKSQTGSGKTAAYGI
PVCELVDWNENKPQALILTPTRELALQVNEDITNIGRFKRIKATALYGQSPFHVQKAELK
QRTHVAVGTPGRVLDHIERGTLPLDRISYLVIDEADEMLNMGFIETVQSIIQALPSERVT
MLFSATFPEDVAKLSRKYMNNPVEIEIKASGLTTATIEHAVIHVPEVNKTALLQDLFIVE
NPDSCIVFCRTQENVDKLFRVMADLDYPADRIHGGMEQDERIEVMNAFRRGQFRYLIATD
VAARGIDITNITHVINYDIPLEKEGYVHRTGRTGRAGKTGKAFTLVTPKDGRRLAEIESY
IGFAIPVVKAPSEEAVDRRREEFEKRLKIVPERKKDKREQLNQQIMKLNFNGGKKKKLRA
VDFVGTIAKIEGVTADDIGIITILDNVTDVEILNGKGPLVLEVMQNTTIKRMQLKVRKGH
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcaacaatttaaagattatggacttggcgaagaaatcgtaaaagcgctggat
agccttgggtatgaaaccccaacggaggttcaaaccaaagtaattccagtagcccttgaa
aataaagatcttgtggttaaatcccaaacaggcagcgggaaaacagccgcctacggcatt
ccagtctgtgagctggtagattggaacgaaaataaaccgcaggctttgattctcacgcca
acccgcgagttggctttgcaagtgaacgaagatattaccaatatcggacgctttaagcgt
attaaagcaaccgcactatacggtcagtctccttttcatgttcaaaaagccgaattaaaa
caaagaacgcatgtcgctgtaggcacaccgggacgggtactggaccatatcgaacgcggc
accctgccgctggatcggatctcataccttgtcattgacgaggcggatgagatgctgaat
atgggcttcatcgagacggtgcaatccattattcaagcactgcctagcgagcgagtgacg
atgttattttccgcgacgttccctgaagatgtagccaagctgtcacgtaaatacatgaac
aatccggtcgagattgagatcaaagcaagtggtcttacaacagccacgattgaacatgcc
gtgattcacgtgccagaggtgaacaaaacagcactgcttcaggacttgttcattgttgaa
aatccagatagctgtatcgtgttctgtcgtacgcaggagaacgtggataaactgttccgg
gtcatggctgacctcgattatccagcggatcgcatccacggaggcatggaacaagatgag
cgcatcgaagtgatgaatgcattcagaagaggacaattccgttatctgattgcaacagat
gtagccgcgcgcgggattgatatcacgaatattacccatgtcatcaactacgatatccct
ttggaaaaagaaggatatgttcaccgtacaggtcgtacgggtcgcgcagggaaaacaggc
aaagcctttaccttggttaccccgaaggatgggagacgtctggccgagatcgaatcttat
atcggatttgcaattcctgtcgtgaaagctccttccgaggaagctgttgaccgtcgtcgg
gaagagttcgagaagcgtttgaagatcgtgcctgaacgcaaaaaggacaagcgtgaacag
ttgaaccaacagatcatgaagctgaacttcaacggaggcaagaaaaagaaactccgtgcg
gtagacttcgtgggcaccatcgccaagattgaaggcgtcactgcagacgacatcgggatt
attaccattctggataatgtaaccgatgtggaaattctgaatggcaaaggcccactcgtg
cttgaggttatgcagaatacaacaatcaaacgcatgcagctcaaggttcgcaaaggtcat
aaatag
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