Pseudomonas taetrolens: NCTC10697_00004
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Entry
NCTC10697_00004 CDS
T08085
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptae03032
]
NCTC10697_00004 (gyrB)
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_00004 (gyrB)
Enzymes [BR:
ptae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC10697_00004 (gyrB)
DNA replication proteins [BR:
ptae03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10697_00004 (gyrB)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10697_00004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Raf1_N
Motif
Other DBs
NCBI-ProteinID:
SQF84304
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All DBs
Position
1:3755..6172
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AA seq
805 aa
AA seq
DB search
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITITIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSELLVLTVRRSGKIWEQTYVHGVPQAPMAIVGESETTGTQIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGIILKDERSGKEELFKYEGGLRAFVDYLNTNKTPVNEV
FHFSVQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKFFSD
FLLERPNEAKLIVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG
REEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK
GKQEQYIKDDEAMEEYMTQSALEDASLHLNEEAPGISGEALERLVYDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVSLEQLGDHAAMQDWMAKYEERLRLVEKSGLVYKASLREDHERNV
WLPEVELISHGHSTFITFNRDFFGSNDYKTVVTLGAQLSTLLDEGAYIQRGERKKAVTEF
KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPSVRRMLKVTIEDAIGADQIFNT
LMGDAVEPRREFIESNALAVSNLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaagaaaatacgtacgactcaacgagcattaaagtgctgaaaggcctggatgcc
gtacgcaaacgtcccggtatgtacattggtgacaccgacgatggcagcggtctgcatcac
atggtgttcgaggtggtcgataactccatcgacgaagcactggctggtcattgcgacgac
attaccatcaccatccatccggatgagtccatcaccgtgcgcgacaacggccgcggtatt
ccggtagatgtgcacaaagaagaaggcgtgtcggccgctgaggtcatcatgaccgtgctg
cacgccggtggtaagtttgatgacaactcctacaaagtatccggtggtctgcacggtgta
ggtgtttcggtagttaacgccttgtccgagttgctggttctgaccgtgcgtcgcagcggc
aagatctgggaacagacctacgttcatggtgtgcctcaagcgccgatggccattgttggc
gagagcgaaaccaccggtacccagattcacttcaagccttcggctgaaaccttcaagaac
atccacttcagctgggacatcctggccaagcggattcgtgagctgtcctttttgaactcc
ggtgttgggatcatcctcaaggatgagcgcagcggcaaagaagaactgttcaagtacgaa
ggcggtctgcgtgcgttcgttgattacctgaacaccaacaagactccggtcaacgaagtg
ttccatttcagcgttcagcgtgaagatggcatcggtgtagaaatcgccctgcagtggaac
gacagctttaacgagaacctgttgtgcttcaccaacaacattccgcagcgcgatggtggt
acgcacttggtgggcttccgctctgccctgacgcgtaacctcaacacctacatcgaagct
gaaggcctggccaagaagcacaaggttgccaccaccggcgatgacgcccgtgaaggtcta
actgcgattatttcggtgaaagtaccggatccaaagttcagttcccagaccaaagacaag
ctggtatcttcagaagtgaagaccgctgttgagcaggaaatgggcaagttcttctccgac
ttcttgcttgagcgaccgaacgaagccaagttgattgttggcaagatgatcgatgcggct
cgtgcgcgtgaagccgcgcgtaaagcccgcgagatgacccgccgtaaaggtgcgctggac
atcgcaggcttgccgggcaaactggccgactgccaggaaaaagacccggcgctgtccgaa
ctgtacctcgtggaaggtgactctgctggcggctccgccaagcagggacgtaaccgccgt
acccaagccatcctgccgttgaaaggcaagatcctcaacgttgagaaagcccgcttcgac
aagatgatttcctcgcaagaggtcggcaccttgatcactgcgctgggctgtggcattggt
cgcgaagagtacaacatcgacaaactgcgttatcacaacatcatcatcatgaccgatgct
gacgtcgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagttgcct
gagctgatcgagcgtggctacatctacatcgctcagccaccgctgtacaaagtgaaaaag
ggcaagcaagagcaatacatcaaagatgacgaggccatggaagagtacatgacccagtcg
gcactggaagatgccagcctgcacctgaacgaagaagccccagggatctccggtgaggcg
ctggagcgcctggtgtacgacttccgcatggtcatgaagaccctcaagcgtttgtcgcgt
ctgtaccctcaggagctgaccgagcacttcatctacctgccagccgttagtctggagcaa
ctgggtgatcacgcggccatgcaagactggatggccaagtatgaagaacgcctgcgtctg
gtcgagaagtcgggtctggtctacaaagccagcctgcgtgaagaccatgagcgtaatgtc
tggttgccggaggtcgaactgatctcccatggtcactcgaccttcatcacctttaaccgt
gacttcttcggcagcaacgactacaagaccgttgtgaccctgggcgctcaactgagcacc
ttgttggacgaaggcgcttacattcagcgtggcgaacgtaaaaaagccgtgaccgagttc
aaggaagccctggactggttgatggccgaaagcaccaagcgtcacaccatccagcgctat
aaaggtctgggtgagatgaacccggatcagctctgggaaaccacgatggacccaagcgtg
cgccgcatgctcaaggtgacgattgaagacgctattggcgctgaccagatcttcaacacc
ttgatgggcgatgccgtagaaccgcgtcgtgagttcatcgaaagcaacgcattggcggtg
tccaacctggacttctga
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