Pseudomonas taetrolens: NCTC10697_00020
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Entry
NCTC10697_00020 CDS
T08085
Symbol
rimN
Name
(GenBank) YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptae03009
]
NCTC10697_00020 (rimN)
03016 Transfer RNA biogenesis [BR:
ptae03016
]
NCTC10697_00020 (rimN)
Enzymes [BR:
ptae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
NCTC10697_00020 (rimN)
Ribosome biogenesis [BR:
ptae03009
]
Prokaryotic type
Other maturation factors
NCTC10697_00020 (rimN)
Transfer RNA biogenesis [BR:
ptae03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC10697_00020 (rimN)
Prokaryotic type
NCTC10697_00020 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Amanitin
Motif
Other DBs
NCBI-ProteinID:
SQF84320
LinkDB
All DBs
Position
1:23203..23760
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AA seq
185 aa
AA seq
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MISTWRVQQAATAIRAGAVIAYPTEAVWGLGCDPWNEEAVERLLAIKSRPVDKGLILVAD
NIHQFDFLFEDFPQDWIDRMASTWPGPNTWLVPHQQLLPEWITGVHDTVALRVSDHPLVR
DLCSLVGPLVSTSANPAGLPAARTRLKVEQYFRGQIDHVLGGNLGGRKNPSLIRDLATGK
VVRPA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcacctggcgcgtacagcaagccgcaacagccattcgcgcaggcgcggtaatt
gcctacccgaccgaagcggtgtggggattgggttgcgacccgtggaacgaagaggccgtt
gagcgtttgctggcgatcaagtcgagacctgtggataaaggcctgattttggtggctgac
aacattcaccagttcgacttcctgtttgaggatttcccgcaggactggattgaccgcatg
gccagcacctggccggggccgaatacctggttggtacctcatcagcaattgttgcccgag
tggatcaccggggttcatgacaccgtggcattgcgcgtgagtgatcacccgctggtgcgt
gacctgtgttcgctggtggggccgcttgtgtcgacctcggccaacccggcgggcttgccg
gcggcgcgtacgcggctcaaggttgagcagtatttccggggccagatcgaccacgtgttg
ggcggcaacctgggaggacgtaaaaatccgagcctgattcgtgatctggccaccggcaag
gttgtgcgcccggcgtaa
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