Pseudomonas taetrolens: NCTC10697_00055
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Entry
NCTC10697_00055 CDS
T08085
Symbol
lysA_1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae00300
Lysine biosynthesis
ptae00470
D-Amino acid metabolism
ptae01100
Metabolic pathways
ptae01110
Biosynthesis of secondary metabolites
ptae01120
Microbial metabolism in diverse environments
ptae01230
Biosynthesis of amino acids
Module
ptae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC10697_00055 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC10697_00055 (lysA_1)
Enzymes [BR:
ptae01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NCTC10697_00055 (lysA_1)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
SQF84354
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Position
1:57322..58569
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALTAIAERFGTPTYVYSRAHIEAQYNAYADALNGTPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQEVAAGLGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLEPFIDALDRLLALIDRLGDCGIYLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERIDGRDLALVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDTETRTYDIVGPICETGDFLAKDRQLALAEGD
FLAVHSAGAYGFVMSSNYNTRGRAAEILVDGDQAFEVRRRETIAELFAGESLLAE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaattaccgggacggcgagctgttcgccgaaggtgtagcgctgacggct
atcgccgagcgttttggcacaccgacatatgtctattcccgggcgcacatcgaagcgcaa
tacaacgcctacgccgatgccctgaacggtacgccgcatctggtctgttttgcggtcaag
gccaactccaacctgggtgtactcaatgtcctggcgcgcttgggcgctggtttcgacatc
gtgtcccgtggtgaacttgagcgtgtactggccgctggcggttcggcagacaaaatcgtg
ttttcaggtgttggcaagacgcgcgacgacatgcgccgtgccctggaagtcggggttcac
tgttttaacgttgaatccaccgatgagctggagcgcctgcaagaggtcgccgccgggctg
ggcgttcgtgcgccggtctcgttgcgggtcaacccggacgtcgatgcgggcacgcacccg
tacatctccaccggcctcaaggaaaacaagttcggtattgccatcgccgatgccgaagat
gtgtacatccgtgctgcgcagttgccgaacctcgaagtggtgggcgtcgattgccatatc
ggttcgcaattgaccacccttgagccgttcatcgatgcactcgatcgcctgctggcgctg
atcgaccgtttgggtgattgcggtatttacctgcgtcacatcgatctgggtggtggcctg
ggcgtccgttatcgtgacgaagagccgccactggctgcggattacatcaaggctgtgcgc
gagcgcatcgacggtcgtgatctggcactggtgtttgagccgggccgttttattgtggcc
aatgcgggcgtcctgctgacccgggtcgagtacctcaagcacaccgaacacaaagacttc
gccattgttgatgcggcgatgaacgatctgattcgcccggcgttgtatcaggcctggatg
gacgtgaccgcggttcgcccgcgcgacaccgaaacacgtacttacgatatcgttgggccg
atttgcgaaacgggcgatttcctggccaaggaccgtcaactggcgctggccgaaggtgat
tttctggccgtgcattcggcgggtgcctatggttttgtcatgagctcgaactacaacacc
cgtggccgcgccgccgaaattctggtggacggtgatcaagcgtttgaagtgcgtcgtcgc
gagaccatcgccgagttgtttgctggcgaaagcctgctggcggagtaa
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