KEGG   Pseudomonas taetrolens: NCTC10697_00056
Entry
NCTC10697_00056   CDS       T08085                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ptae  Pseudomonas taetrolens
Pathway
ptae00300  Lysine biosynthesis
ptae00470  D-Amino acid metabolism
ptae01100  Metabolic pathways
ptae01110  Biosynthesis of secondary metabolites
ptae01120  Microbial metabolism in diverse environments
ptae01230  Biosynthesis of amino acids
Module
ptae_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ptae00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC10697_00056 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC10697_00056 (dapF)
Enzymes [BR:ptae01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCTC10697_00056 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: SQF84355
LinkDB
Position
1:58574..59404
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIKVETKSGIIELNVRSDGQISVDM
GPPRLVPADIPFVADAQALSYEVDVDGQRVELAAVSMGNPHAVLRVDDINAAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRGQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
ILDLPGGRLSIEWEGPGHSVIMTGPAMRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgttgctgcgttttactaaaatgcacggtctgggcaatgacttcatggtgctcgacctg
gtcagccagcacgcgcatattttgcccaagcacgccaaacaatggggtgatcggcacacg
ggcgtcggttttgaccagctattgattgtcgaggcaccgagtaacccggaagtggatttc
cgttatcggatcttcaactccgacggttcggaagttgagcaatgtggcaacggtgcgcga
tgttttgcgcgctttgtgctcgacaagcgtttaaccaccaagcgccagatcaaggtcgaa
accaaaagcggcatcatcgagctcaatgtgcgcagtgatgggcaaatcagtgtcgacatg
gggccgccccgtctggttccggctgacattccgtttgtggccgatgctcaagccttgagt
tatgaggtagacgtcgacggtcagcgcgtcgagctggctgccgtatcaatgggcaatccg
catgcggtactgcgtgtggacgatatcaatgccgcaccggtgcatgagctgggcccgaaa
atcgagcatcacccgcgctttccggcacgggtcaatgtcggttttttgcatgtgatcgac
cgtcagcgcgggcagctgcgtgtctgggaacgcggtgccggggaaacccaggcctgcggt
actggcgcctgtgccgccgcggtggctgccatcagtcaaggctggatggactcgccactg
atccttgatctacccggcggccgtttgtccatcgagtgggaaggcccaggccattccgtg
atcatgaccggcccggcgatgcgtgtttacgaaggacaagtccgtttatga

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