Pseudomonas taetrolens: NCTC10697_00056
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Entry
NCTC10697_00056 CDS
T08085
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae00300
Lysine biosynthesis
ptae00470
D-Amino acid metabolism
ptae01100
Metabolic pathways
ptae01110
Biosynthesis of secondary metabolites
ptae01120
Microbial metabolism in diverse environments
ptae01230
Biosynthesis of amino acids
Module
ptae_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC10697_00056 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC10697_00056 (dapF)
Enzymes [BR:
ptae01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC10697_00056 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
SQF84355
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Position
1:58574..59404
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGVGFDQLLIVEAPSNPEVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIKVETKSGIIELNVRSDGQISVDM
GPPRLVPADIPFVADAQALSYEVDVDGQRVELAAVSMGNPHAVLRVDDINAAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRGQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
ILDLPGGRLSIEWEGPGHSVIMTGPAMRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcgttttactaaaatgcacggtctgggcaatgacttcatggtgctcgacctg
gtcagccagcacgcgcatattttgcccaagcacgccaaacaatggggtgatcggcacacg
ggcgtcggttttgaccagctattgattgtcgaggcaccgagtaacccggaagtggatttc
cgttatcggatcttcaactccgacggttcggaagttgagcaatgtggcaacggtgcgcga
tgttttgcgcgctttgtgctcgacaagcgtttaaccaccaagcgccagatcaaggtcgaa
accaaaagcggcatcatcgagctcaatgtgcgcagtgatgggcaaatcagtgtcgacatg
gggccgccccgtctggttccggctgacattccgtttgtggccgatgctcaagccttgagt
tatgaggtagacgtcgacggtcagcgcgtcgagctggctgccgtatcaatgggcaatccg
catgcggtactgcgtgtggacgatatcaatgccgcaccggtgcatgagctgggcccgaaa
atcgagcatcacccgcgctttccggcacgggtcaatgtcggttttttgcatgtgatcgac
cgtcagcgcgggcagctgcgtgtctgggaacgcggtgccggggaaacccaggcctgcggt
actggcgcctgtgccgccgcggtggctgccatcagtcaaggctggatggactcgccactg
atccttgatctacccggcggccgtttgtccatcgagtgggaaggcccaggccattccgtg
atcatgaccggcccggcgatgcgtgtttacgaaggacaagtccgtttatga
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