Pseudomonas taetrolens: NCTC10697_00161
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Entry
NCTC10697_00161 CDS
T08085
Symbol
algB
Name
(GenBank) two component sigma-54 specific Fis family transcriptional regulator
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10697_00161 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptae02022
]
NCTC10697_00161 (algB)
Two-component system [BR:
ptae02022
]
NtrC family
KinB-AlgB (alginate production)
NCTC10697_00161 (algB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
VpsR
Mg_chelatase
cREC_REC
AAA_22
AAA_2
AAA_19
AAA_16
Xre-like-HTH
MCM
HTH_23
HTH_29
nSTAND3
DUF1858
IstB_IS21
HTH_50
DUF815
HTH_17
Motif
Other DBs
NCBI-ProteinID:
SQF84459
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All DBs
Position
1:complement(157555..158901)
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AA seq
448 aa
AA seq
DB search
MESVKEHQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADSLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPAMMSVLETARQVAGTDANILILGESGTG
KGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFGHTRGAFTGASESTLGRVNQADA
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVVEYARPARGFSAEAREALANYRW
PGNIRELRNVVERASIICPQEVVEIGHLGMAEQTTPNAPRIGAALSLDQLEKAHIGAVLA
TSETLDQAAKTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagtcaaagagcaccagggccgcattctgctggtcgacgatgaatccgccatc
ctgcgcacgttccgctactgccttgaagatgagggctataccgtcgccacggccaacagt
gcggcgcaggccgattctctgcttcagcgccaagtgttcgacctgtgctttctggatctg
cgcctgggcgaagacaacggcctggatgtgttggcccagatgcgtattcaagccccgtgg
atgcgggtcgtgatcgtcacggcacactccgccgtcgacacggccgtggatgccattcaa
gcgggtgccgccgactacctggtcaagccctgcagccctgaccagttgcgcctggcgacc
gccaaacaactggaagtgcgtcagttgtccgcccgcctcgaagccctcgaaggtgaagtc
cgcaaacccaaggacggcctcgactcccacagtccggccatgatgtcggtgctggaaacc
gcccgccaggtagcaggtaccgatgccaatatcttgattctgggtgagtccggtaccggt
aaaggcgaactggcgcgggcaatccatggctggagcaagcgcgccaagaaatcctgcgtc
acgatcaactgcccttcactcaccgcggaactgatggagagcgagctgttcggtcatacc
cgtggcgccttcaccggcgccagtgaaagcacgttgggccgggttaaccaggccgatgcc
gggacgctgtttctggatgaaatcggtgattttccgctggctttgcagccaaaactgctg
cgtttcattcaagacaaggaatatgaacgcgttggcgaccctgtcacccgtcgcgcggat
gtgcgaatcctggccgcgaccaacctcaatctggaagacatggttcgtgacgggcgcttc
cgcgaagacttgctctaccgtctgaatgtgatcaccttgcatctacctcccctgcgtgag
cgcagcgaagacattctgaccctggccgatcgttttctggcccggttcgtcgtggaatac
gcccggcctgcccgagggttcagtgcagaagcgcgtgaggcattggccaattaccgatgg
cccggcaacattcgcgaattacgcaatgtggttgagcgcgcgagcattatttgcccccag
gaggtcgtcgaaatcggtcatttgggcatggccgagcaaaccaccccaaatgccccgcgc
attggtgcggcgctaagcctcgaccagctggagaaggcgcatatcggggcggtactggcg
accagcgaaaccctcgaccaagcggcgaaaaccctgggcattgacgcctcgacactttat
cgaaaacgcaagcagtacaacctgtga
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