Pseudomonas taetrolens: NCTC10697_00240
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Entry
NCTC10697_00240 CDS
T08085
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10697_00240 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptae03019
]
NCTC10697_00240 (rppH)
Messenger RNA biogenesis [BR:
ptae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC10697_00240 (rppH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
SQF84537
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All DBs
Position
1:234649..235128
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQEAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRA
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggattattctgacaaatgatgctggt
caggtactttgggctcgccgtatcaatcaagaagcgtggcagtttccacagggcggtatc
aaccctgatgagacgccggaagacgccttgtaccgtgagctgaacgaagaagttggcctt
gaacgcgaagatgtagaaatactcgcctgcacgcgaggctggttgcgttatcgtttgccg
caacggctggtccgtacccacagtcaaccgctgtgcatcggccagaagcaaaagtggttt
ttgctgcgcctgatctctaacgagcagcgggtgcggatggatttgaccggtaaaccggaa
ttcgatggctggcgttgggtcagctattggtatccgttgggccaggtggtgacattcaag
cgcgaggtctatcgtcgcgctctcaaagagcttgccccgcgccttttaacgcgcgcctga
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