Pseudomonas taetrolens: NCTC10697_00250
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Entry
NCTC10697_00250 CDS
T08085
Symbol
cmpR1
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptae03000
]
NCTC10697_00250 (cmpR1)
Transcription factors [BR:
ptae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCTC10697_00250 (cmpR1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR
HTH_23
HTH_24
HTH_50
PBP_like
HTH_29
HTH_41
HTH_30
HTH_28
HTH_8
HTH_3
MarR_2
Motif
Other DBs
NCBI-ProteinID:
SQF84547
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Position
1:245764..246627
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AA seq
287 aa
AA seq
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MLSAELKAFYRVAQLGSITQAAKKLGLSQPTVTTQIRHLESQYAVELFYRGGRRLTLSDE
GVRLLPMVKLLLQQEADIEFFLRNSGQGAGTLRIAATAPYYILDLVKAFRARLPQIQVSV
DIGNSQQVLEALEEYRVDVAASSQLLEDSRLIRRVLGSDPLVLAVHRNHPLAAFEHVPLS
ALAGHCLLMREEGSTTRQLTETLLGAAGVGFGPLLEIGSRESIREAVLRNIGISIIARQE
VPHDPQLRVLTLENAPVIHEYLYCLKERKSARLPAAFLGLAQEMAPA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgctgagtgcagagctgaaagcgttttaccgggtggcccaattgggcagcattactcag
gccgcgaaaaagctcgggctcagccagccgaccgtgaccacacagatccggcaccttgaa
agccagtacgcggtagagctgttctatcgcggcggacggcgcctgaccctcagtgatgaa
ggcgtgcgcctgctgccgatggtcaagttgctgttgcagcaagaggccgacattgagttc
ttcttgcgcaatagcggccagggcgcgggcacgttgcgcatcgccgcgaccgcaccgtat
tacatcctcgatctggtcaaagcctttcgcgcccggctgccgcagattcaggtatcggtg
gatattggcaattcccagcaggtgctggaggcgctggaggaataccgggttgatgtggcc
gcttcatcgcagttgctcgaggattcgcgcttgattcgccgggtgcttggcagcgatccg
ctggtgctggcggtgcaccgcaatcaccccttggccgcgtttgagcatgtaccgctcagt
gccttggccggacattgcctgttgatgcgtgaagagggctcgaccacacgccagttgacc
gaaacgctgcttggagcagcaggtgtggggtttggcccgttgctggaaattggcagtcga
gagtcgattcgcgaagcggtattgcgcaacatcgggatcagtatcatcgcccgccaggaa
gtcccccatgatccgcagctgcgcgtactgaccctggaaaatgcgccagtgatccatgag
tacctctactgcctcaaagagcgtaaatccgcacgcttgccggcagcgtttcttggattg
gcgcaggaaatggccccggcttga
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