Pseudomonas taetrolens: NCTC10697_00329
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Entry
NCTC10697_00329 CDS
T08085
Symbol
rsmE
Name
(GenBank) ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptae03009
]
NCTC10697_00329 (rsmE)
Enzymes [BR:
ptae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
NCTC10697_00329 (rsmE)
Ribosome biogenesis [BR:
ptae03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC10697_00329 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CYNS_N
Motif
Other DBs
NCBI-ProteinID:
SQF84625
LinkDB
All DBs
Position
1:328583..329302
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AA seq
239 aa
AA seq
DB search
MRLSRFFIDAPLSLGEHELPEAQAHYIGRVLRMAEGDALQVFDGSGHEFSGRLLEVGKKR
VRVLLDETFAGQVESPLVIHLGQGLSRGERMDWAIQKATELGVNEITPIMSERCEVRLKD
ERADKRLAHWRQVAISACEQCGRSRVPVIHPPVLLGDWIKTTEADLKLVLHPVSEPLASH
AKPARLAFLIGPEGGLTDNEVDQAQAAGYQPARLGPRVLRTETAPVVALAVAQQLWGDF
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtcccgtttctttatcgatgcaccgttgagccttggcgagcacgaattgcct
gaagctcaggcgcattacattggccgcgtgttgcgcatggccgagggcgatgccctgcaa
gtgttcgacggttcggggcacgagttttcggggcgtttgctggaggtcggcaaaaagcgt
gtgcgcgtgctgctggacgaaacgttcgccgggcaggtcgagtcaccgctggtcattcac
ctcggccagggtttgtcccgtggtgaacgtatggattgggccattcagaaggccaccgag
ttgggggtcaacgaaatcactccgatcatgagcgagcgctgcgaagtgaggctcaaggac
gaacgtgccgacaagcgtctggcacattggcggcaggtggcaatcagcgcctgtgaacaa
tgcgggcgctcacgggtgccggtgattcatccgccggtgttgctcggcgactggatcaaa
accaccgaggcggacctcaagctggtgttgcacccggtctccgaaccgcttgccagccac
gccaagccagcgcgtctggcgttcctgatcggtcccgaaggcggcttgaccgacaatgaa
gtcgatcaagcccaggccgccggctaccagccagcgcgccttggcccacgggtattgcgt
actgaaactgcgccggtggttgccttggccgtggcgcagcagttgtggggcgatttctaa
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