Pseudomonas taetrolens: NCTC10697_00356
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Entry
NCTC10697_00356 CDS
T08085
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptae03009
]
NCTC10697_00356 (dbpA)
Enzymes [BR:
ptae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC10697_00356 (dbpA)
Ribosome biogenesis [BR:
ptae03009
]
Prokaryotic type
rRNA helicases
NCTC10697_00356 (dbpA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
SQF84652
LinkDB
All DBs
Position
1:complement(356624..358009)
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AA seq
461 aa
AA seq
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MTTIATAFNSLPLSAAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAF
GIGLLNPVNPRFFGCQALVICPTRELADQVAKEIRRLARAEDNIKVLTLCGGVSFGPQIG
SLEHGAHIIVGTPGRIQQHLRKGSLKLDGLNTLVLDEADRMLDMGFYDAIEDIIRQTPER
RQTLLFSATYPVGIKQLSSKFMRNPQQVKAEALHTDSQIEQRFYEISPEERMSAVTKVLG
HFRPQSCVAFCFTKQQVQETVDHLTSKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAISLVAPSEAHRAQAIE
QLQKAPLNWETLDTLQSKGGAPLLPAMSTLVIGAGRKDKVRPGDILGALTGDAGIPGAQV
GKIAIFDFQAYVAVDRTVAKQAAQRLSEGKIKGRVLRVRVL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccattgccaccgcttttaactctctgcctctgtccgccgccatgctggctaac
ctcgactccctcggttatgcccagatgacgccgatccaggcgcagagcttgccggtgatc
ctcaaaggcatggatctgatcgcccaggccaagaccggcagcggcaaaaccgccgccttc
ggcatcggcctgctgaaccccgtcaacccgcgtttcttcggttgccaggccctcgtgatc
tgcccgacccgtgaactggcggaccaggttgccaaagagatccgccgtctggcccgcgct
gaagacaacatcaaagtgctgaccttgtgtggcggtgtgtccttcggcccgcaaatcggc
tcgcttgaacacggcgcgcacatcatcgtcggcaccccgggccgcattcagcagcacttg
cgcaaaggctcgctaaagctcgacggtctcaacaccctggtgctcgacgaagccgaccgc
atgctcgacatgggcttctacgacgccatcgaagacatcattcgccagacccctgagcgt
cgccagaccctgctgttctcggccacctacccggtcggcatcaagcaactgtcgtccaag
ttcatgcgcaatcctcagcaggtcaaggctgaagccttgcacactgacagccagatcgag
cagcgtttctacgagatctcgcctgaagagcgcatgagcgccgtgaccaaggtgctgggg
catttccgtccgcaatcgtgcgtcgcgttctgcttcaccaagcagcaggttcaggaaacc
gtcgatcacctgacctccaagggtatttcggcagtcggcctgcatggcgatctggaacag
cgtgaccgtgatcaggtgctggcgatgtttgccaaccgttcgacctcggtgctggttgca
accgacgtagcggcccgtggcctggacatcgacgcgctggacatggtgatcaacgttgag
ctggcccgtgactccgaaatccatatccaccgcgtgggccgtaccggtcgtgccggtgaa
aaaggcatcgccatcagcctggtagcgccttccgaagcccaccgcgcccaagccatcgag
cagctgcaaaaggcgccgttgaactgggaaaccctggacaccctgcaatccaagggcggc
gcgcccctgctgccggccatgagcacgctggtgatcggcgccggtcgtaaagacaaggtt
cgcccaggcgacatccttggcgccctgactggcgacgcgggcatcccgggtgcccaggtc
ggcaaaatcgcgatttttgacttccaggcctacgtggcggttgaccgtaccgtggccaaa
caggctgcacagcgcttgagcgaaggcaaaatcaaaggccgcgtattgcgcgtgcgggtt
ttgtaa
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