Pseudomonas taetrolens: NCTC10697_00379
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Entry
NCTC10697_00379 CDS
T08085
Symbol
rhaS_2
Name
(GenBank) AraC family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptae03000
]
NCTC10697_00379 (rhaS_2)
Transcription factors [BR:
ptae03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NCTC10697_00379 (rhaS_2)
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GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
SQF84675
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All DBs
Position
1:384625..385563
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AA seq
312 aa
AA seq
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MPQDFYFLLMPGFSSLGFISAIEPLRVANRFRGELYRWHVLSCDGGAVLASNGMSVNAEA
GLEVLKAGATLLVVAGFDPLAHVTPALKHWLRRLGNEGVTLGGIDTGSFVLAQAGVLDGH
RLTLHWEALEAFKESFPQLQVTQELFEIDRQRITCAGGTASIDLMLDLIAQACGPELAIQ
VSEQFVLGRIRPRKDHQRMQVATRYGTHNKKLVQVIGEMEQHTEPPLSTSQLAQGISVTR
RQLERLFRLHLNDTPRNFYLGLRLEKARQLLRQTDMSVLDISIACGFESPSYFTRSYRAR
FDCAPSQDRVPG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgccccaggatttttactttctgttaatgcccggtttttcgtcattgggctttatttct
gcgatagaacctctgcgcgtggccaaccgttttcgcggtgagctgtaccgttggcacgtg
ctcagttgcgacgggggggccgtgttggcaagcaatggcatgtccgtgaatgccgaggcg
gggctggaggtgctgaaagccggcgcgacgctgttggtggtggccggcttcgacccgctg
gcccatgtgactcccgccttgaagcactggttgcgacgcctgggcaatgagggcgtgacg
ctcggtggtatcgacacgggcagctttgtgctggcgcaggcgggtgtactcgacggccat
cgactgaccctgcactgggaagcgctggaggcgttcaaggagtccttcccacagttgcag
gtgacccaggaactgttcgagattgatcgccagcgcattacctgtgcgggtggcacggcg
tcgatcgacttgatgctggacctgatcgcccaggcttgcggtcccgaactggcgatacaa
gtctccgagcaattcgtgctggggcgtatccgcccgcgtaaagaccaccagcgcatgcaa
gttgccacgcgctacgggactcacaacaagaagctggtgcaggtgatcggagagatggag
caacacaccgagccgccactgagcacctcgcaattggcacagggcatcagtgttactcgg
cgtcagctggagcggctgttccgcctgcaccttaacgacacaccacgcaacttttacctc
ggtctgcgcctggaaaaagcccgtcagctgttacgtcagaccgacatgagtgtgctcgac
atcagtattgcctgtggcttcgagtccccgtcctacttcactcgcagttaccgcgcacgg
tttgactgcgcgccaagccaggaccgggtaccaggctag
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