Pseudomonas taetrolens: NCTC10697_00412
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Entry
NCTC10697_00412 CDS
T08085
Symbol
polC_1
Name
(GenBank) putative DNA poymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03030
DNA replication
ptae03430
Mismatch repair
ptae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10697_00412 (polC_1)
03430 Mismatch repair
NCTC10697_00412 (polC_1)
03440 Homologous recombination
NCTC10697_00412 (polC_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptae03032
]
NCTC10697_00412 (polC_1)
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_00412 (polC_1)
Enzymes [BR:
ptae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10697_00412 (polC_1)
DNA replication proteins [BR:
ptae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10697_00412 (polC_1)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10697_00412 (polC_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
SQF84708
LinkDB
All DBs
Position
1:complement(419837..420547)
Genome browser
AA seq
236 aa
AA seq
DB search
MSFLSWLLPRKKPVLSLEQQQRVLQLPPAAGWSDMSLRQQRWVVVDLETSGLNLNRDQVL
SIGATVIEDGAIDLGQSFERTLLRAHTPLNPSVLLHGLGPGAIAAGSDPAQALLDFLAFV
GESPLLAFHAPFDQHMLARALKDSLDYRLQHPFMDVAMLAPMLCPQVTQRDAGLDRWIEH
FNLQIENRHNASADALATAELALILFSRARAQGIHSPLALQQRLNQWQRRKQVHSF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctgtcctggctgttaccccgtaaaaagccggtgttgagccttgagcaacaa
cagcgcgtgttgcaactgccgcctgccgcggggtggagcgatatgtctttgcgccagcag
cgctgggttgttgtcgatctggaaaccagtggtttgaacctcaaccgcgatcaggtgctg
tcgattggcgcgacagtgattgaagacggggcgatcgatctgggccaatcgtttgaacgc
accttgttgcgcgctcacaccccgctcaaccccagcgtgctgttacatggtctggggccc
ggtgcgattgccgccggcagcgaccccgcgcaagccctgctggattttctggcatttgtc
ggtgagagcccgttgctggcgtttcatgcaccgtttgaccagcacatgctggcccgggcc
ctgaaggacagccttgactaccgcttgcagcacccgttcatggatgtagcaatgctggcc
cccatgctctgcccgcaggtcacccagcgtgatgcggggctggatcggtggattgagcac
ttcaacctgcagattgaaaaccgccacaacgccagcgccgatgccttggccaccgccgaa
ctggcgttgatcctgttcagccgggcccgggcccaaggcattcacagcccgcttgccctg
caacaacggctgaaccagtggcaacggcgcaaacaggtccacagcttctaa
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