Pseudomonas taetrolens: NCTC10697_00554
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Entry
NCTC10697_00554 CDS
T08085
Symbol
mscS4
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptae02000
]
NCTC10697_00554 (mscS4)
Transporters [BR:
ptae02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC10697_00554 (mscS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
SQF84835
LinkDB
All DBs
Position
1:555417..557531
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AA seq
704 aa
AA seq
DB search
MFKFKTAILLIILLLTGNGILQAAPTLASVIKAEEVDGKPPVLVNGGLLGALGAGMDEVQ
GRLGLSMHLLDGWRLRAARAGEEAEVLAEQAYEHPSWNAAADFLIVSVTWFAAFIGLMLL
ARLVLNYVCSRRVTQNKVRVKSLLGYALPYLFPAMIALPLTLSVSRFLQDSMGVSLALSL
AYASSGGVFCAALVLTMNAMFDVGHKRRAVDIIRRTAPRSLFVIGFSAALSDALNSLKIA
WQIGVNLASCLSVVAGLIACIAFAHLVVRLRRPVAHLIRNRALAQRLGQPALQESLRIFS
VLWYWPILLMLLVSAFNLLGVGESSERTLRNALMTSGLLIGTVFLSTTLHHWFRTAPRSS
GAYKVRLLNVMYAVLRIVLAVTFIELLVQIWGFSLLAFASDSSTGKVISDSLGHILLILL
VTWLAWVVLDTAIQQALQPTVNRRGSREPSTRTKTILPLLRNAIKVILVVVCTITTMANL
GVNVAPFLAGAGVIGLAIGFGSQQLVQDVITGLFIIIEDTISVGDWVVVDSNHSGTVEGL
TIRTLRLRDSRGFVHSVPFGQIKVVINHSRQFAYAFFSVQFTYDSDMDKATEVIREAGQQ
ISDDPLLSLSLQGSLTIFGVDSMSLDGVVITAQFRTVSGAQNTISRAFNARLKKLVDKSA
DVHFAQHYPQGFLMPVRETEGRAESATVKQQPAVLLTDIPPQSQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaattcaaaacagctattttgctcatcatcctgttgctcacagggaatggcatc
cttcaggcggcacccacgctggcttccgtgatcaaggccgaagaagtcgatggcaagccg
cctgtgctggtcaacggtgggttgcttggggcactgggtgctggaatggatgaagtccag
gggcggttgggtttgagcatgcacctgctggatggctggcgcttgcgtgcagcacgggca
ggggaagaggctgaagtgctcgccgagcaggcctatgaacatccctcctggaatgcggcc
gccgatttcctcattgtatccgtcacctggtttgccgctttcataggattaatgctgctc
gcacggttggtgctcaactatgtgtgtagccgtcgcgtgactcaaaacaaggtacgggtg
aagtccctgctgggctatgcgctgccgtatctgtttccggcgatgatcgctttgccattg
acgttgtctgtcagtcgttttttacaggactcaatgggtgtctcgctggcgctcagtctc
gcgtatgccagcagtggtggggttttctgcgcggcgctggtgctgaccatgaatgcaatg
ttcgatgtcgggcacaagcgccgcgcggtggatatcattcgccggacggctccgcgctct
ttgtttgtaatcggtttttccgcggccctgagtgatgcgcttaacagcctgaaaatagcc
tggcaaataggtgtcaatctcgccagttgcttgtcggttgtggcaggactgattgcgtgt
atcgcatttgctcatttggtggtcaggttgcggcgtccggtggcgcacctgattcgcaat
cgggcattggcacagcgtttggggcagccggcgcttcaagagtccctgcggatcttttca
gtgctgtggtattggcccattctgctgatgctgctggtgtcggcgttcaacctgctgggg
gtgggcgaaagcagcgagcgaaccttgcgcaacgccttgatgacttcgggcttgctgatt
ggcaccgtgtttttaagtaccacgctgcaccattggttcaggaccgcccctcgaagcagc
ggtgcgtataaagtgcgtttgcttaatgtgatgtatgccgttctgcggattgtcctggcc
gtgacctttatcgagctgctggtacagatctggggtttttccctgttggcatttgcttca
gacagcagtacgggtaaggtcatcagcgattcactggggcatattttattgattttgttg
gtgacgtggctggcctgggtggtgctcgataccgcgatccagcaggccttgcagcctacc
gttaaccgacgggggagccgggagccaagcacccgcaccaagaccatcctgccgttgttg
cgcaacgcgatcaaagtgattctggtggtggtgtgtaccatcactaccatggccaatctg
ggggtcaacgtcgcgccctttcttgccggtgccggggtgatcgggctggcaatcggcttt
ggttctcagcagttggtacaagacgtgatcacggggctgttcattattattgaagacacc
atttcggtcggcgactgggtggtggtggactccaatcattctggcaccgtcgagggactg
accattcgcaccttgcgtctgcgcgattctcgcggctttgtgcactcggttccgtttggt
cagatcaaggtggtcattaaccattcccgtcaatttgcgtacgccttcttttcggtgcag
ttcacctatgactccgatatggacaaagccactgaggtgatccgcgaggctggtcagcag
atcagtgatgaccctttgctcagtcttagcctgcaaggttcactgaccatttttggggtc
gatagcatgagcctggacggggtggtgattaccgcgcagtttcgtacggtctccggtgct
cagaacaccatcagccgtgccttcaacgcccgacttaaaaagcttgtggataagtccgcg
gatgtacactttgcacaacattatccacagggctttctcatgccggtgcgagagaccgaa
ggccgcgctgaatcggccacggtcaagcagcagcctgcggtgttactgaccgacatcccg
ccacagtcacaatga
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integrated database retrieval system
