Pseudomonas taetrolens: NCTC10697_00582
Help
Entry
NCTC10697_00582 CDS
T08085
Name
(GenBank) type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC10697_00582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ptae02044
]
NCTC10697_00582
Secretion system [BR:
ptae02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCTC10697_00582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
SQF84863
LinkDB
All DBs
Position
1:581801..583276
Genome browser
AA seq
491 aa
AA seq
DB search
MSTHGAQQKDDQNTAYSILDDIITQTRLTPEDEAYGIARRGVAAFIEELLKPQNKGEPVK
KAMVDRMIAEIDAKLSNQMDEILHHPSFQALESAWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGEPVGAIIANYFMTPSAPDVKLMQYVSSV
ACMSRAPFVAAAGPKFFGLESFTGMPNLKDLKDHFGGPQFAKWQSFRESEDARYMALTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYTFASRLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
NSVQKPKFFGISAEGRAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPGAEVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcatggcgcacagcaaaaagacgatcaaaataccgcgtacagcatccttgac
gacatcattacccaaactcggctgacgcccgaagacgaggcttatggcattgcccggcgc
ggtgtcgcggcgtttatcgaagagctgctaaagccgcaaaacaagggcgagccggtcaag
aaagccatggtcgatcgcatgatcgccgagatcgacgccaaactgagcaaccagatggat
gaaatccttcaccatccgtcattccaggcattggagtcggcctggcgtggcctgcaattg
ctggttgatcgcaccaactttcgtgaaaacatcaagatcgaaatcctcaatgtgtccaaa
gaggacctgctggacgatttcgaggattcgccggaggtcatgcaatccggtctctacaaa
catatctacaccgccgagtacggccagttcggtggcgagcccgtaggcgccatcattgcc
aactacttcatgacgcccagcgcgcctgacgtgaagttgatgcaatacgtgtcgagcgtg
gcctgcatgtcccgtgcgccgtttgtcgccgctgccgggcccaagttcttcggactcgaa
agctttaccggcatgccgaacctcaaagacctgaaggatcactttggcgggcctcagttc
gccaaatggcagagctttcgcgaatctgaagatgcacgctacatggccttgaccgtgccg
cgctttttgctgcgcaacccttacgaccccgaagaaaacccggtcaagtccttcgtctac
aaagaaaccgtcgccaacagtcatgagcactacttgtggggcaacacggcttataccttc
gcctccaggttgactgacagttttgccaagttccgctggtgcccaaacatcattggcccg
caaagcggtggtgctgtcgaagacctgccgctgcatcacttcgaaagcatgggtgaaatc
gaaaccaagattccgaccgaagtcctggtttcagaccgtcgtgaatacgagctggccgag
gaaggcttcatttccctgaccatgcgcaagggcagcgacaacgctgcgtttttctcggcc
aactcggtgcaaaaaccgaagttcttcggcatcagcgcagaaggccgggcagccgaactg
aactacaagctcggcacgcagctgccttacatgatgatcgtcaaccgcctggcgcattac
ctgaaggtcctgcagcgcgagcaactggggtcgtggaaggagcgcacggaccttgagctg
gaacttaacaagtggattcgtcagtacgtggcggaccaggaaaaccccggcgctgaggtt
cgtggccgtcgtccgctgcgcgctgcccagatcaccgtcagtgatgtcgaaggcgagcct
ggctggtaccgcgtcagcctgaatgtgcgcccgcacttcaagtacatgggcgcggacttc
accttgtcgctggtcggcaagctggacaaagagtaa
DBGET
integrated database retrieval system
