Pseudomonas taetrolens: NCTC10697_01031
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Entry
NCTC10697_01031 CDS
T08085
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptae03021
]
NCTC10697_01031 (rapA)
Transcription machinery [BR:
ptae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NCTC10697_01031 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
SQF85300
LinkDB
All DBs
Position
1:complement(1060571..1063417)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGETRQYSLRNAPLTRVRFSPG
DTIIHFEGWKMTVREVEDADGIMVYHGLNEQNEAVTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYHTLEHTSRQLQSPLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLIVVPENLQHQWLVEMRRRFNLEVALFDEERFIESDA
SNPFEDCQLALVALEWLVDDPKAQDALFAAGWDLLVVDEAHHLVWHEDQVSPEYDLVEQL
AGVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESDNYRPVAQAVQELLDK
GRLSPEAHQTIHGFLGAEGDSLLAAVNEGDAEASARLVRELLDRHGTGRVLFRNTRAAIQ
GFPERKLHAYPLPCPDEYLELPLGEHAELYPEVSFQAQPDTSEEERWWRFDPRVEWLTDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFAHHLVLFDMPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QQRLFQWYHEALNAFLNTCPTGNALQHRFGPRLLPLLEAADDEEWQALIDEARAERERLE
QELHTGRDRLLELNSGGSGEGEALVEAILEQDDQFTLPIYMETLFNAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELIYVSEVVAPRALQLGRYLPPAALRCLLDANGNDLSSRVAF
DTLNEQLESVPRASANKFVQAQRDSLTPKINAGEAKIAPRHAERVAEAQRRLAADTEEEL
ARLTALQAVNPSVRDSELVALRKQREQSLAMLEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagctgagctaggt
ttgggcaccgttctggcacaggacggtcgcttgttgaccgtgctctatccggccactggc
gaaacccgtcaatattcgctgcgcaatgcaccgctcacgcgtgtacgtttctcgccgggt
gacacgatcatccacttcgaaggctggaagatgaccgtgcgcgaagtcgaagatgccgac
ggcatcatggtctaccacgggctcaacgagcaaaacgaagccgtcaccctgccggaaacc
cagctctcgaacttcatccagttccgcctggccagtgatcgcttgtttgccggccagatc
gacccgctgtcctggttttccctgcgctaccacaccctcgaacacaccagccgccagttg
caatcgccgctgtggggcctgggtggcgtacgggcacaaccgattgcccaccaattgcac
attgcccgtgaagtggcagaccgtatcgcaccccgtgtactgctggctgacgaagtgggt
ctgggtaaaaccatcgaagccggtctggtcatccatcgccagctgctcagtggccgtgcc
agccgcgtgctgatcgtcgtgccggaaaacctgcagcatcagtggctggttgagatgcgc
cgtcgtttcaacctcgaagtggcgttgttcgacgaagaacgtttcattgaaagcgatgcc
agcaacccgtttgaagactgccagctggcgctggtagcgctggaatggctggtagacgac
cccaaggcccaggacgccctgtttgcagccggctgggacctgctggtggtcgacgaagcg
caccacctggtatggcatgaagatcaggtcagccccgagtatgacctggttgaacaactt
gccggggtgatcccgggcgtgttgctgctgaccgcaactccggaacaactgggccaggac
agccacttcgcccgtttgcgcctgctcgacccgaaccgtttccacgatttggcggccttc
cgcgccgaaagcgacaactatcgccctgtggcccaggcggttcaggaactgctggataaa
ggccgtctgtcgccagaagcccatcaaaccattcatggtttcctgggtgccgaaggggac
agcttgctggctgccgtcaacgaaggcgacgccgaagccagcgctcgcctggtgcgcgaa
ttgctggaccgtcacggcactggccgtgtcctgttccgaaatacccgcgccgcgattcaa
ggatttcctgagcgcaaactgcacgcttacccgctgccgtgcccggacgaatacctggag
ctaccgctgggtgaacacgccgaactgtatccggaagtcagcttccaggcccagccggac
accagcgaagaagaacgctggtggcgcttcgaccctcgggttgagtggctgaccgacacg
ctgaagatgctcaagcgcaccaaagtgctggtgatctgtgctcacgcggaaaccgcaatg
gatctggaagacgctctgcgcgtgcgctccggcatcccagcgacggtcttccacgaaggc
atgaacattcttgagcgtgaccgtgcagcagcctacttcgcagacgaagagttcggcgcc
caagtactgatctgctccgaaatcggcagtgaaggccgtaacttccagtttgcgcaccac
ttggtgctgttcgacatgccgtcccacccggatcttctggaacagcgtattggtcgtctg
gaccgaatcggccagaagcacgtcattgaactgcatgtgccttaccttgaaaccagcccg
caacagcgcctgttccagtggtaccacgaagcactgaatgccttcctcaatacctgccct
accggcaacgccctgcaacaccggttcggtccacgcctgctgccgttgcttgaagccgca
gacgatgaagagtggcaggccctgatcgatgaagcgcgggccgagcgcgaacgcctcgaa
caagaactgcacaccggtcgcgaccgcctgctggagcttaactccggtggttcgggcgag
ggcgaggcgctggttgaagcgatccttgagcaagacgatcaattcaccttgccgatttac
atggaaaccctgttcaacgcctttggcatcgacagcgaagaccattccgaaaacgccttg
atcctcaagcccagcgaaaagatgctcgacgccagcttcccgctgggcgacgacgaaggc
gtcaccatcacctacgatcgcaaccaggcgctgtcgcgtgaagacatgcagttcatcacc
tgggaacaccctatggtgcagggcggcatggatctcgtgctctccggctcgatgggcaac
acggcggtagcgctgatcaagaacaaggcactgaagcccgggacagtcctgcttgagctg
atttacgtcagtgaagtggtcgcgccccgcgccttgcagctgggtcgttacctgccgccg
gctgccctgcgctgcctgctggatgccaacggcaacgacctgtcgtcccgggtagccttc
gacaccctgaacgaacaactggaaagcgtaccgcgggccagtgccaacaagttcgttcaa
gcacagcgtgacagtctcacgccgaagatcaacgccggcgaagccaaaatcgcaccgcgt
cacgcagaacgtgtcgcagaggcccagcgtcgcctggcagccgacaccgaagaagagctg
gcacgcctgaccgccctgcaggcggttaacccgagcgtgcgcgacagcgaactggttgcc
ttgcgcaaacagcgcgagcaaagcctggcaatgcttgaaaaagccgccctgcgccttgaa
gcaattcgcgtcctggttgcaggctaa
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integrated database retrieval system
