Pseudomonas taetrolens: NCTC10697_01136
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Entry
NCTC10697_01136 CDS
T08085
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptae03009
]
NCTC10697_01136 (rumA)
Enzymes [BR:
ptae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC10697_01136 (rumA)
Ribosome biogenesis [BR:
ptae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC10697_01136 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Methyltransf_11
Cons_hypoth95
MTS
PCMT
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_15
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_37
Methyltransf_12
DREV
Ubie_methyltran
UPF0020
Motif
Other DBs
NCBI-ProteinID:
SQF85400
LinkDB
All DBs
Position
1:1169270..1170622
Genome browser
AA seq
450 aa
AA seq
DB search
MAKQERGLRFQPAGGTRAPQVPTGKKQRLNIERLANDGRGIAFLEGRTWFVSGALAGEEV
EARVLGAHGKIVEARAERVFKANEIRRAAPCAHAGKCGGCSVQHLPHEEQLALKQRMLAE
QLMRVAGVEPEAWAAPLTGPEFGYRRRARIAVRWDAKAKRLDVGFRAAGSQDIVAIDHCL
VLVQALQPIMTGLPAMLRQLSKPQALGHVELFSGSAIAVLLRHMAPLNDADMQVLQHFCL
THNAQLWLHGESEPQPVDLSRTLGYRLESWNLELAYRPGDFVQVNAGVNEAMVAQALEWL
APQADERILDLFCGLGNFALPLARQVREVVAVEGVATMVERAAQNAVSNSLHNASFVQAD
LSQPLVDAAWAKEGFSAVLLDPPRDGAFEIVRKLSGLGAKRLVYVSCNPATLARDTIELM
KQGYRLKRAGILDMFPQTAHVEAMALFEAD
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcaagagagaggcctgcgcttccagcccgctggcggcactcgggccccgcaa
gtgcctacgggcaagaaacagcgtttgaacatcgagcgtttggccaacgacggccggggt
attgcctttttggaagggcgtacctggtttgtgtcgggggcattggccggtgaagaagtt
gaagcgcgggtactgggcgctcatggcaaaatcgtggaggcacgtgccgagcgcgtattc
aaggccaatgagatccgccgtgccgcaccctgtgcccatgccggaaagtgcggtggctgc
agcgtgcagcatttgcctcacgaggagcagcttgctctgaaacagcgcatgctggccgag
cagctaatgcgtgtggctggcgtcgagccagaagcctgggctgcgcccctgaccggcccc
gagttcggctaccgccgtcgcgcgcggattgcggtgcgctgggatgcaaaggccaaacgc
ctggacgtaggatttcgggctgccggcagccaggacatcgtggccatcgaccactgtctg
gtgctggtacaggccctgcaacccatcatgaccgggttacccgccatgctgcgccagttg
agcaagccgcaggccctggggcatgtcgagctgttcagtggttcggcgattgcagtgctg
ttgcgtcatatggcaccgcttaacgatgccgacatgcaggtgttgcagcatttttgcctc
acgcataacgcccaattgtggctgcatggtgaaagtgagccgcaaccggtcgatttgagc
cggactctgggctaccgtctggagtcgtggaatttggagctggcgtatcgcccgggcgac
tttgttcaggtcaatgccggtgtcaatgaagccatggtggcgcaggcgctggagtggctg
gcgccgcaagctgacgaacggattcttgacttgttctgtgggctgggtaacttcgcattg
ccactggcgcggcaagtccgcgaggtggtagcagtcgaaggggttgcgacgatggtcgaa
cgcgccgcgcaaaacgcggtcagtaattcgctgcataatgcatcgtttgtacaggctgac
ctgtcgcaaccgctggtggatgccgcatgggccaaagaaggctttagtgccgtgctcctc
gatccaccgcgcgatggtgcctttgaaatcgtgcgcaagctgtctggcctgggtgccaaa
cgtttggtgtacgtgtcgtgcaacccggccacgctggcgcgcgacaccattgaattgatg
aaacagggttatcggttaaaacgtgccgggatcctcgatatgtttccgcaaaccgcgcat
gtcgaggcgatggcgttatttgaggcagactag
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