Pseudomonas taetrolens: NCTC10697_01330
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Entry
NCTC10697_01330 CDS
T08085
Symbol
fadB
Name
(GenBank) fatty oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae00071
Fatty acid degradation
ptae00280
Valine, leucine and isoleucine degradation
ptae00310
Lysine degradation
ptae00362
Benzoate degradation
ptae00380
Tryptophan metabolism
ptae00410
beta-Alanine metabolism
ptae00640
Propanoate metabolism
ptae00650
Butanoate metabolism
ptae00907
Pinene, camphor and geraniol degradation
ptae00930
Caprolactam degradation
ptae01100
Metabolic pathways
ptae01110
Biosynthesis of secondary metabolites
ptae01120
Microbial metabolism in diverse environments
ptae01200
Carbon metabolism
ptae01212
Fatty acid metabolism
Module
ptae_M00087
beta-Oxidation
ptae_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC10697_01330 (fadB)
00650 Butanoate metabolism
NCTC10697_01330 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC10697_01330 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC10697_01330 (fadB)
00310 Lysine degradation
NCTC10697_01330 (fadB)
00380 Tryptophan metabolism
NCTC10697_01330 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC10697_01330 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC10697_01330 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC10697_01330 (fadB)
00930 Caprolactam degradation
NCTC10697_01330 (fadB)
Enzymes [BR:
ptae01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC10697_01330 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC10697_01330 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC10697_01330 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NCTC10697_01330 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SQF85579
LinkDB
All DBs
Position
1:1362937..1365084
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVSAVDAVVAPAQLANAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASQCLIGLFLNDQEL
KKKAKAYDKIARDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVENHVK
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKRGKQ
KKVVDSSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggtaacggctcttgaaagcggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggcagtggatgcgatcaaggcagatgcttcggtcaagggtgtcatcgtttccagc
ggtaaagacgtctttatcgtcggcgcagacatcaccgaattcgtcgaaaacttcaagttg
ccggatgccgagctgattgcaggcaatctcgaagccaacaaaatcttcagtgatttcgaa
gacctcaacgtaccgacagttgcggccatcaatggcatcgcactgggtggcggtctcgaa
atgtgcctggccgcggacttccgggtcatggccgacagcgccaagattggcctgcctgaa
gtcaagctgggcatttacccgggttttggcggcaccgttcgcctgccacgtctgattggc
gtcgacaatgctgtggagtggattgcctccggcaaggaaaaccgcgctgaagatgcgctg
aaagtcagcgccgttgatgctgtggttgcccccgctcaattggcgaatgccgcgctggac
ctgatcaagcgcgccatcagtggcgagctggactacaaggccaagcgtcagccgaagctc
gagaagctcaagctcaacgccattgaacaaatgatggctttcgaaacggccaaggggttc
gtggccggccaggcaggcccgaactatcctgccccggttgaagcgatcaagacgatccag
aaagccgccaacttcggtcgtgacaaggcgctggaagtggaagctgccggctttgccaag
ctggccaagacgtccgcttcgcagtgcctgatcggcctgttcctgaacgatcaggaactc
aagaaaaaggccaaggcctacgacaagattgccagggacgtgaagcaggcagccgtactt
ggcgcaggcatcatgggtggcggtattgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaatgaacacggcatcgagcagggcctggcggaagccgccaagctg
ctggttggtcgcgttgataaaggtcgtatgaccccggcgaagatggctgaagtgctcaac
ggcattcgtcctaccttgtcttacggcgatttcggccacgtcgacctggtggtcgaagcg
gtagtcgagaacccgaaggtcaagcaagccgtgctggctgaagtggaaaaccacgtcaag
gaagatgccattctggcctccaacacctcgaccatttccatcagcttgctggccaaggcc
ctcaagcgtccggaaaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggcgagaagtccagcgatctggctgtagcaaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgattgcccgggcttcctggtc
aaccgcgtgctgttcccgtatttcggcggtttcgcccgcttggtcagtgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcttacctg
atggacgtggtcggcatcgacaccggtcaccacggccgtgacgtcatggctgaaggtttc
ccggatcgcatgaaagacgatcgccgctcggcgattgatgctctgtacgaagccaagcgc
ctgggtcagaaaaacggcaagggtttctatgcctacgaggcagacaagcgcggcaagcag
aagaaagtcgttgattcgagcgtgcttgaagtgctcaagccgatcgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgttgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgcagccgaagccgatatgggcctggtctac
ggtattggcttccctctgttccgtggcggcgccctgcgctacatcgattcgatcggtgtt
gcagagttcgtggccctggccgatcagtacgctgacttgggcgcgctgtaccacccgact
gcgaagctgcgtgagatggccaagaacggccagagcttcttcggttaa
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