Pseudomonas taetrolens: NCTC10697_01453
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Entry
NCTC10697_01453 CDS
T08085
Symbol
mscS_1
Name
(GenBank) mechanosensitive ion channel MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptae02000
]
NCTC10697_01453 (mscS_1)
Transporters [BR:
ptae02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC10697_01453 (mscS_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
SQF85700
LinkDB
All DBs
Position
1:complement(1494154..1496370)
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AA seq
738 aa
AA seq
DB search
MIAGPSVHSAKSVFLEVDRLVFLRLFALPSYLLICLLALLPVASTQAAGLPGLLGSSTSQ
AQPTEPLGQSLDEVIKNLENDQQRSKLLADLKKLRDATKQAQPEAEIGVLGLIGSTLSDL
EKQFSGDDSPTYRWSREIEQAKDELVALMLPASQWLPIIFAFALIIMVWSLLAALLIWVS
HRVRLRFGLSEELPQHPKAVDMLRFALRKLGPWLVALVITVYMSYALPSSLGKDLAMVLA
YALVIGTCFSATCVILFSLLDGPHRHHALHILRHQAFRPLWWIGSFAAFGEALSDPRLVA
TLGVHLAHTAATFANVMAALSTGLFIIRFRRPIAHLIRNQPLSRRLTRRALSDSIELIGT
YWYVAALILVGVSLVATFISAGDTSTALRQSLICTVLVVLCMVINGLVRRHALKPQRGHK
RHALYSDRLKSFVYTLVHLMVWLVFIELGLRVWGMSLISFTEGDGHEVSVKLFSLGGTLL
FAWLIWILSDTAVHHALTRSRKGLANARAQTMMPLIRNVLFVAIFIIALIVALANMGMNV
TPLLAGAGVIGLAIGFGAQSLVADLITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTV
RLRDIDGIVHTIPFSEIKSIKNYSREFGYAIFRVAIPYNMEIDDAIKLMRDVGQKMRTDP
LQRRNIWSPLEIQGVESFESGSAILRARFKTAPIKQWEVSRAFNLSLKRHLDEAGLDLAT
PRLSVQVVTTSGGILQKD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagggcctagcgtacactcggccaaatccgtatttctcgaggttgatcgccta
gtgttccttcgtctgttcgcactgccctcctacctgcttatttgcttgctggccttgctg
cccgtggcgtcaactcaggccgcgggcttgccaggcttgcttggcagctcgacaagccag
gcgcaaccgactgagccgttagggcagtcgctggacgaggtgatcaagaacctggagaac
gatcagcaacgcagcaagttattggctgatctgaagaagctgcgcgacgcgaccaaacag
gcgcagcccgaagccgaaatcggcgttctggggctgatcggcagcaccctcagcgacctc
gaaaaacaattttcgggcgatgacagccctacctatcgctggtcccgggaaattgaacag
gccaaggatgagctcgtcgcattaatgctgccggcgagccaatggctaccgatcattttt
gcctttgcgctgattatcatggtgtggagcctgctggccgcgttgctgatttgggtgagc
catcgggtacgcctgcgctttggcctcagcgaagaattgccacaacaccccaaagccgtc
gatatgttgcgttttgccttgcgcaagctgggcccctggctggtggcgctggtgatcacc
gtgtacatgagctatgccttgccgtcgtcgctgggcaaagacctggcgatggtgctcgca
tatgccctggtgatcggcacctgtttctctgccacgtgcgtcatcctcttttccttgctt
gacggcccgcaccgccaccatgccctgcatattcttcggcatcaggcctttcgcccgctg
tggtggatcggcagttttgcggcctttggcgaggcgctgagcgatccgagactggtcgcc
acactcggcgtgcatctggcccataccgccgccacctttgccaatgtcatggctgcactg
tccaccgggctgttcatcattcgcttccggcgccccatcgcccacctgatccgcaaccag
ccgctgtcccgtcgtctgacccgacgcgcattgagtgacagcatcgagctcatcggcacc
tactggtacgtggcggcattgattctggtaggcgtttcactggtcgcgacctttatatcg
gcgggcgataccagcaccgccttgcgccagtcgctgatctgtaccgtactggtggtgttg
tgcatggtgatcaacggcctggtacgccggcatgcgctaaaaccccagcgcggacacaaa
cgccacgcactgtattccgatcgcttgaaaagtttcgtctacaccctcgtccatttaatg
gtctggctcgtgttcatcgaactggggctgcgggtgtggggcatgtcgctgattagcttc
accgagggcgatggccatgaggtcagtgtcaaattgttcagcctcggcgggacgctgctg
tttgcctggctgatctggattctgtccgataccgccgtgcaccatgccctgacccgctca
cgcaaaggcttggccaatgcccgcgcacaaaccatgatgccgctgatccgcaacgttctg
tttgtagcaatcttcatcattgcgctgatcgttgccctggcaaacatgggcatgaacgta
acgcctctgctggccggtgcgggcgtcatcggtctggccattggtttcggtgctcaatca
ctggttgccgatctgattaccggcctgttcatcatcatcgaagactccctggccatcgac
gactacgtggatgtcggcggccacctggggacagtagaaggcctgacaattcgaaccgtg
cgcctgcgggacatcgatggcatcgtgcacaccatcccgttcagcgagatcaaaagcatc
aagaactactctcgtgagttcggttacgcgatcttccgggtagcgatcccctacaacatg
gaaatagacgacgcgatcaagctgatgcgtgatgtcggccaaaaaatgcgcactgatccg
ctgcaacgtcgcaacatctggtcgccgctggagattcagggcgtggagagttttgagtcg
ggcagtgcgattctacgtgcgcgcttcaagacggcaccgatcaaacaatgggaagtatcc
cgcgccttcaacctgtcgctgaagcggcacctggatgaagccggcctggacctcgccacc
ccgcgcctgagcgtgcaggtggtgaccaccagcggcgggattttgcagaaggattga
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