Pseudomonas taetrolens: NCTC10697_01758
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Entry
NCTC10697_01758 CDS
T08085
Symbol
ygdH
Name
(GenBank) lysine decarboxylase
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae00230
Purine metabolism
ptae00240
Pyrimidine metabolism
ptae01100
Metabolic pathways
ptae01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC10697_01758 (ygdH)
00240 Pyrimidine metabolism
NCTC10697_01758 (ygdH)
Enzymes [BR:
ptae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
NCTC10697_01758 (ygdH)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
DUF6218
Motif
Other DBs
NCBI-ProteinID:
SQF85995
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All DBs
Position
1:complement(1856476..1857849)
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AA seq
457 aa
AA seq
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MVQRHVINASVSPKGSLETLSQREVQQLSEVGSGSSYTLFRQCVLAILNTGAHVDNAKTI
LEAYQDFEVRIHQQDRGVRLELLNAPADAFVDGEMIASTREMLFSALRDIVYTQSGLDSP
RIDLSNSQGITDYVFHLLRNARTLRPGVEPKIVVCWGGHSISTEEYKYTKKVGHELGLRS
LDICTGCGPGVMKGPMKGATISHAKQRLVGGRYLGLTEPGIIAAEAPNPIVNELVILPDI
EKRLEAFVRVGHGVIIFPGGAGTAEEFLYLLGILMHPDNSEVPFPVVLTGPKDSAPYLQQ
LHEFVGATLGEAAQQHYQIIIDNPAEVARQMTAGLKAVKQFRRERNDAFHFNWLLKIDEG
FQRPFDPTHANMAALQLRRDLPPHELAINLRQAFSGIVSGNVKEKGIHMIEQFGPYEIHG
DAAVMGPLDKLLQAFVEQHRMKLPGGAAYVPCYRVIS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaagacacgtcatcaacgcttcggtcagcccaaaaggcagcctggagacgctt
tcacaacgtgaagtccaacaactcagcgaagtgggctcaggctccagctacacactgttt
cgccaatgcgtactggctattctcaataccggcgctcacgtcgataacgcaaaaaccatt
cttgaggcataccaggacttcgaggtccgcatccatcagcaagaccgtggcgtacgtctc
gagttgctgaatgctcccgctgacgcgtttgtagacggcgaaatgatcgccagtacccgg
gagatgctgttcagcgccctgcgcgacattgtctacacccaaagcggcctcgacagcccg
cgcattgacctgagcaactcgcaaggcatcaccgactacgtgttccatctgttacgcaac
gcgcgcacgctgcgtccgggcgtcgagcccaagattgtcgtgtgctggggcggtcactcg
atcagcaccgaagagtacaagtacaccaagaaagttggccacgaactgggcctgcgcagt
ctggatatctgcaccggttgcggccccggcgtgatgaaggggcccatgaaaggcgcgacc
atttcccatgccaaacagcgtctggtcggtggacgctatctggggcttaccgagccgggc
atcatcgccgccgaagcgccaaaccccatcgtcaacgagctggtgatcctgccggacatc
gagaaacgtctagaagcatttgtccgggttggccacggcgtgatcattttcccgggcggt
gccgggacagccgaagagtttctgtacctgctcggcatcctgatgcaccccgacaacagt
gaagtaccgttcccggtggtgttgaccgggccaaaggattccgcaccctatctccagcaa
ctgcatgaatttgtgggggccacgctgggtgaagcggcacagcagcattaccagatcatc
atcgacaatccggccgaggtggcccgccagatgacggcaggcctcaaggcggtgaagcag
ttccgccgcgaacgcaatgacgcgtttcacttcaactggctgttgaaaatcgatgaaggt
tttcagcgtccgttcgacccgacgcacgccaacatggcggcgctgcaactgcgtcgcgac
ctgcccccgcatgagctggcaatcaatctgcgccaggccttctccgggatcgtgtcaggg
aacgtgaaagagaaaggcattcatatgatcgagcagttcgggccttatgaaattcatggc
gacgctgccgtgatggggcctctggacaaactgctgcaagcgtttgtcgaacagcaccgc
atgaaactccctggcggcgctgcgtatgtgccgtgttatcgggtgatcagctaa
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integrated database retrieval system