Pseudomonas taetrolens: NCTC10697_01898
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Entry
NCTC10697_01898 CDS
T08085
Symbol
cynR_3
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptae03000
]
NCTC10697_01898 (cynR_3)
Transcription factors [BR:
ptae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCTC10697_01898 (cynR_3)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_23
MarR_2
Motif
Other DBs
NCBI-ProteinID:
SQF86133
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All DBs
Position
1:2016393..2017319
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AA seq
308 aa
AA seq
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MTVKQIRAFLAVAQYLSFATACERLHLSQSALSLTIKALEEGLGGRLFSRTTRNVALTPE
GESLLPLARRLIADWDNAEDELRQLFTLQRGRVTLAAIPSFSCNLLPPILKSFRMRYPKL
NVTINDVINEQVLEMVRDRHVELGVAFEPMSGASLTFTPLYLDRFVAVVPRDSALAGRGD
IDWKTLLEQPFITLQRPSAVRVMLEEHLQARQMTLPVEFESHQLATVGRMVASGLGVSAV
PALCAEQMQELGACCITLHNPVVERAIGVLTKPGHELSAAAQAMFDSLLVMAAASGRGPA
IGKAGPSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaaacagatccgtgcctttctcgcggtggctcaatacctcagctttgccaca
gcctgcgaacgcctgcatttgtcacagtcggccttgagcctgaccatcaaggcgctggaa
gaggggcttggcggcaggctgttcagccgcaccacacgcaatgtagccctgacaccggaa
ggcgagtcgctgttacccctggcgcgccggctgatcgccgactgggacaacgccgaggat
gagttgcggcaactgtttaccctgcagcgtgggcgggtaacgttggcggccataccgtcg
ttctcctgcaacctgttgccgccgatccttaaaagctttcgcatgcgttaccccaagctc
aacgtcacgattaatgacgtgatcaatgagcaagtgctggagatggttcgcgatcgccat
gtggaattgggcgtggccttcgagccgatgtcaggggcatcgttgacctttacccccttg
tatctcgaccgtttcgtcgccgtggtgcccagggattcagcgctggccgggcgtggggac
attgactggaaaactctgctcgaacagccgttcatcacgttgcaacgaccctccgccgtg
cgcgtgatgcttgaagagcatttgcaggcgcggcaaatgaccttgccggtggagttcgaa
agtcatcaactggccacggtcgggcgcatggtcgccagcgggcttggggtcagcgcggta
ccggccctgtgcgccgagcaaatgcaagaactgggcgcgtgctgcatcaccctgcataac
cctgtggtggagcgagccatcggggtgctgaccaaaccgggtcatgagttgtcggcggcg
gcccaggcgatgtttgacagcctgttggtcatggcggcggcgtcgggaagggggccagcg
ataggaaaagcaggaccttcggtttaa
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integrated database retrieval system
