Pseudomonas taetrolens: NCTC10697_02020
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Entry
NCTC10697_02020 CDS
T08085
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_02020 (sbcC)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10697_02020 (sbcC)
Archaeal homologous recombinant proteins
NCTC10697_02020 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
nSTAND3
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
SQF86255
LinkDB
All DBs
Position
1:complement(2157575..2161216)
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNTGRDAKVPDADGEIATGDPRTLLRRGTGEGYAEVDFLGIDGRRYRARWETNRAREKA
TGKLQASRQSLRDLDSDQLLASQKGDYKLQLEARLGLNFEQFTRAVMLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGKRAFDKAKEARDAHKQLQDQAVGVTPLTPKARAELDQAF
EAAQQQLKTQQGQLKQLEQQHTWLKTLRELQEQQHSAAEQLQQAQAHWEAQAAQRQTLHW
LEQLAPQRHQFARLAELHSQLTPLAEQIAAHLQQQTGLSQQQAVLQQTLQAAQEAATRAQ
TEQRENTPRLQQAHLEQANLLRLSQALGEQQALQQQAEQACAEGRQALNTLLERQQHSAE
HLAHIATRLEHSNELAPLASAWEGYRPQLQKLVQLSNTLSKGRDELPVLEQRAQLAAQQL
TDVRNSLEILFQEAGAEPQAVNEQIQTLGSLLDESRKQQRDFEDLQRLCHSQQALDTRLH
ELQAKQHSVQLERDRLSQQGIQTKTELAQAEQTLDVTRQLLERQRLARSASVEELRGQLQ
DDQPCPVCGSHEHPYHQPEALLQSLSRHDEQEEANARSMVEGLKETLVQLREKVGGLIAR
QKEFLLQQERIHQEQEALTPSLEAHPHCPQWQAQEPARREQWLSQRLSQLQQSINQDQQR
QNTLLALQKEAAHLQQHLQRCTEASQLASQQLNAQLEHINADTLRLEGELADFASLLPAA
TLMALRDNPSACFMALDQQVADRLAQLDQQRDEQTEQTERAGNIEREQYQHANRSKELEA
LQRSVEALTVQQQASEHSLRDLLGDHVSAEAWQQQLEQALEQARSAQLQASEALQATGNQ
LIELAAELKAQQARLQAVQHEHGTLSAQLEHWREQHRELDEARLQQLLAYDDAHLRDLRQ
QLQSSEKAVEQARVLVQEREQRLGQHQAQANGNLDAVALDTALDELHTQLEASEQRCAEL
RAQQSEDQRRQEANQALAQRIAQAYEQWQRWARLNALIGSATGDTFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIQV
RRQGNGLSTVEVK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccattcgcctgaaaaacctggcatcgctggccggaccttttgagctg
gacttcaccgccgaacccttggccagcgccggcctgtttgcgattaccgggcccaccggc
gctggcaaaagcaccttgctcgatgcgctgtgcctggcgctgtttggtgccgtgccacgc
ctcaacaacaccgggcgcgatgccaaggtgccggatgccgacggtgaaatcgccaccggc
gacccgcgcaccctgctgcgtcgggggacgggcgagggttatgccgaggtcgactttctg
ggcatcgatggccgtcgttaccgtgcccgctgggaaaccaaccgcgcccgcgaaaaagcc
accggcaaactgcaggccagccgccagagcctgcgcgacctggacagcgatcaactgctg
gccagccagaaaggcgattacaagctccagctggaggcgcgcctgggcttgaacttcgag
cagttcacccgcgccgtgatgctggcccaaagcgaattcagtgcgttcctcaaggccgat
gacaacgagcgcagcgagctgctggaaaagctcaccgataccgcgctctacacacgcctg
ggcaagcgtgccttcgacaaggccaaagaggcccgcgacgcccataaacagctgcaagac
caggccgtcggcgtcaccccgctgacgcccaaggccagagccgagctggatcaggcgttt
gaagcggcccagcagcaactcaagacccaacagggccagctcaaacagctggagcagcaa
cacacctggctcaaaaccctgcgcgaactgcaagaacagcaacacagtgccgccgagcag
ttgcaacaggcccaggcccactgggaagcgcaggccgcccagcgccagaccctgcactgg
ctggaacaactagctccgcaacgccatcagtttgcccgactggctgaactgcacagccaa
ttgacgccactggccgagcagatcgctgcgcacctgcagcagcaaaccgggctcagccag
caacaggccgtgctgcagcaaaccctgcaagcggcgcaagaagcggcaacccgggcgcag
accgaacaacgcgagaacaccccccgcttgcaacaggcccatcttgagcaggccaacctg
ctgcgcctgagccaggcccttggcgagcagcaagccctgcagcaacaagccgagcaggcg
tgcgccgaaggccggcaggcgctgaatacactgcttgaacgccagcaacacagtgcagaa
cacctggcgcacattgccacccgcctcgaacacagcaacgaactcgctcccctggccagc
gcctgggagggctaccgcccacagctacaaaaactggttcagttgagcaacaccctgagc
aagggccgtgacgagctacccgttcttgagcaacgtgcccagcttgccgcacagcagctg
accgacgtgcgcaacagcctggaaatcctgttccaggaagccggggccgagccacaggcg
gtcaacgagcaaatccagaccctgggcagcctgctcgatgaaagccgcaagcagcagcgc
gacttcgaagatttgcagcgcttgtgccacagccagcaggcgctcgatacccgcctgcat
gaactgcaagccaagcagcacagcgtacagctcgaacgcgaccgtctcagccagcaaggg
attcagaccaaaaccgaactggcccaggccgaacaaaccctggacgtcacccgccaactg
ctggaacgccagcgtctggcacgcagcgccagtgtcgaagaactgcgcgggcaattgcag
gatgaccagccgtgcccggtgtgtggcagccacgagcatccttatcatcagcccgaggcg
ttgttgcagagcctgagccgccacgacgagcaggaagaagccaacgcccgcagcatggtt
gaagggctcaaggaaaccctggtccagctgcgtgaaaaagtcggtggcctgatcgcccgg
cagaaggagtttttgctccagcaagaacgtatccatcaagagcaagaggccctgacccca
agccttgaagctcacccgcactgcccgcaatggcaggcacaagagccggccaggcgcgaa
cagtggctgagccaacgcctcagccagctgcaacagagcatcaaccaggatcagcagcgc
cagaacaccctgctcgccctgcaaaaagaagcggcccacctgcagcagcacctgcagcgc
tgcaccgaagccagccagctcgccagtcagcaactaaacgcgcagctagaacacatcaac
gccgacaccttgcgccttgagggtgagctggccgactttgccagcctgctgcccgctgca
accctgatggcgctgcgcgacaacccgtcggcctgctttatggccctcgaccagcaagtg
gctgatcgcctggcgcaactcgatcagcagcgcgacgaacagaccgagcagactgaacgc
gctggcaacatcgagcgtgaacagtatcaacacgccaatcgcagcaaagaactggaagcc
ctgcaacgcagcgttgaggccctgaccgtgcaacaacaggccagcgagcacagcctgcgg
gacttgttgggtgaccatgtcagcgccgaggcgtggcagcaacagctggaacaggcgctg
gagcaggcccggagcgcgcagcttcaggccagcgaagccttgcaagccaccggcaaccag
ttgattgagctggccgccgaactcaaggcacaacaggcgcgcctgcaggcagtgcagcac
gagcacggcaccctgagtgcccagctcgaacactggcgtgaacagcatcgcgagctggat
gaagcgcggctgcagcaactgctggcgtatgacgacgcacatctgcgcgacctgcgccag
caattgcaaagcagcgaaaaagccgtggagcaggcccgggttctggtgcaggagcgcgag
cagcgcctgggccagcatcaggcgcaagccaatggcaatctcgacgctgttgcactggac
accgccctcgacgagctgcacacacagctggaggccagtgaacagcgctgcgccgagctg
cgcgcgcaacagagtgaagatcagcggcgccaggaagccaatcaggcactggcgcagcgt
atcgcccaggcatacgaacaatggcagcgctgggcccggctcaatgcattgatcggctcg
gccaccggcgacacgttccgcaagattgcccaggcttacaacctcgacctgctggtgcat
cacgccaacgcacagctgcgccagctggtccggcgttatcgcctcaaacgtggcggcagc
atgctcggtttgctggtcatggacaccgagatgggcgatgagctgcgttcggtgcactct
ttgtcaggcggggaaaccttcctcgtgtcactggcgctggccctcggcctggcctcaatg
gcgtccagtacactgaaaatcgaatcgctgttcattgatgaaggctttggcagccttgat
cccgaatcgctgcaattggcgatggacgctctggacggattgcaggcccagggccgcaag
gtcggggtcatctcccacgtccaggaaatgcacgaacgcataccggtgcagatccaggtc
cggcgtcagggcaatggcttgagcaccgtggaggttaaatga
DBGET
integrated database retrieval system
