Pseudomonas taetrolens: NCTC10697_02021
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Entry
NCTC10697_02021 CDS
T08085
Symbol
sbcD
Name
(GenBank) exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptae
Pseudomonas taetrolens
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_02021 (sbcD)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10697_02021 (sbcD)
Archaeal homologous recombinant proteins
NCTC10697_02021 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
SQF86256
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All DBs
Position
1:complement(2161213..2162457)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHACFLTWLLARLASDHPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVSAHEQHPELTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGQLDA
ERLLIPLPDATGNIAAWCLALPFLRPAEVTGAHLGDDYLRGIGHVHERLIEAANAKRKPG
QALVAISHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSLSYVALGHLHKPQRVNSEDR
IRYCGSPIPLSFSEISYPHQILDVQLEGETLVSVTPRLIPRAVNLQRVGPAPLAEILAQL
ADLPNIDLLADIQRQPWLEVRVTLDEPQPDLRQQIETALQGKSVRLVRISAEYAGNGSRA
GDEDASRLIELDQLTPQELFSRAWQENYGSEADEQTLKDFAVLLQEVQQEGEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtttcacacttccgattggcacctggggcaaaacctccacggccaggaacgc
gattttgaacacgcttgctttttaacctggctgctcgcccgactggccagcgaccaccct
gacgttctattgattgccggtgacatcttcgacaccgtcaacccgccggtcaaagcccag
gaacggctctacgacttcatcgtcagcgcccatgaacaacaccccgaactgaccatcgtc
atgatcgccggcaatcacgactccggctcgcggattgaactccccgcgccgttgatgcgc
cgtctgcgaacccacgccctgggccgggtcctgtggctcgacgatggccagctggatgcc
gagcggctgctgatcccgttgcccgatgcgaccggcaatatcgcggcctggtgcctggcg
ctgccttttctgcggccggcagaagtgaccggtgcccacctgggcgacgactacctgcgg
ggcatcggccacgtgcatgaacggctgatcgaagccgccaatgccaagcgcaagcccgga
caagccctggtcgccatcagccatgcgcacatggccggcggttcggtctcggaagactcc
gagcgcagcctgatcatcggtaacgccgaagccctgcccgccagcctgtttggcccaagc
ctcagctatgttgcgctgggccatctgcacaagccgcaacgggtcaacagcgaagaccgg
atccgttactgcggctcccctatcccgctgtcattttcggaaatcagctacccgcatcag
atcctcgatgtgcagctcgaaggggaaaccctggtcagcgtcactccccgactgatcccg
cgcgccgtcaacctgcagcgcgtgggcccggcgccgctggccgagatcctcgcccaactg
gccgatctgccgaatatcgacttgctggccgatattcagcgccagccctggctcgaagta
cgggtcacgcttgacgagccgcagcccgacttgcgccagcagatcgaaaccgccttgcag
ggcaagtcggtgcgtctggtgcgcatctccgccgagtatgccggtaacggcagccgggcc
ggcgatgaggacgccagccgtctgatcgagctcgaccagctcaccccccaggagctgttc
agccgcgcctggcaggaaaactacggcagcgaagccgacgagcaaactctcaaagacttt
gcggtgttgctgcaagaagtacagcaggaaggtgaacagccatga
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