Pseudomonas taetrolens: NCTC10697_02302
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Entry
NCTC10697_02302 CDS
T08085
Symbol
opdB
Name
(GenBank) putative proline-specific porin OpdB
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae01501
beta-Lactam resistance
ptae02020
Two-component system
Module
ptae_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10697_02302 (opdB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC10697_02302 (opdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptae02000
]
NCTC10697_02302 (opdB)
01504 Antimicrobial resistance genes [BR:
ptae01504
]
NCTC10697_02302 (opdB)
Transporters [BR:
ptae02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC10697_02302 (opdB)
Antimicrobial resistance genes [BR:
ptae01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
NCTC10697_02302 (opdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
SQF86532
LinkDB
All DBs
Position
1:2484443..2485768
Genome browser
AA seq
441 aa
AA seq
DB search
MNNTRALVLLLASACALPAFGAELTAPGDGFIAGSDVEVLLRNSYFNRSKEDGRRDARDW
TQGVLGHFNSGFTQGTLGVGVEAFAYLGLKLDAPADKSGTGNLPVHDDGQPADNYSKVGA
ALKLRLSNSVLKVGEQRPQTPVFGVSHFRIVPQTATGLSLISREVEGLEVQAGHFTAATS
PVTTHADGDLWAVMAGVTTPTADYLGGSYQLTPQVSVSLYGSRFEDIWNQYYVNLESRTD
IDTLNQFGLGLSAYRTLDTGRARAGEIDNTSVGLSTFWRHGAHRWLLGLQKIDGDTPFDY
LGVGDNDRNGRNGNDQGASIQLPNAAQFSDFNGPQEKSWQVRYDVSLATYGVPGLTFMSR
YVRGWGIDGSHIAATGPYSGRYGDDGKHHETNLEVRYIVQSGPAKGLSVRARQAWHRANS
DQGSGNLDDFRLITDYPIDIL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaccagagcccttgttctgttgttggccagcgcctgcgcgctgcctgcattc
ggcgctgagctaacggcacctggggacgggtttatcgcaggcagtgatgtcgaagtattg
ctgcgcaactcctacttcaatcgcagcaaggaagacggtcgccgtgacgctcgcgactgg
acccagggcgtactcggccacttcaactccggctttacccaaggcacccttggggttggc
gtagaagcgtttgcgtacctgggcttgaagctggatgcacccgccgacaaatccggcacg
ggcaacttgcccgtgcatgatgatggccaaccggcggacaactattccaaagtcggcgct
gcgctcaagctgcgtttgtccaacagcgttctgaaggtgggcgaacaacgaccgcagaca
ccggtgtttggcgtcagccattttcgaatcgtgccgcagaccgccactggtttgtcactg
atcagtcgcgaagtcgaagggcttgaagttcaggccgggcacttcactgctgctaccagc
cccgtcaccacccatgccgatggtgatctgtgggctgtcatggccggcgtgacgacgcca
accgcagactacctgggcggcagctatcaattgacgccgcaggtcagcgtcagcctgtac
ggctcgcgtttcgaggacatctggaaccagtactacgtcaacctcgaaagccgtaccgat
atcgacacgctgaatcagttcgggctaggccttagcgcgtatcgcaccctggatacgggg
cgggccagggccggtgagatcgacaacaccagtgtcggtctgtcgaccttctggcgccat
ggcgcacaccgctggctgttgggcttgcagaaaatcgatggcgacacgccgttcgattac
ctgggcgtgggcgacaacgaccgcaatggtcgtaacggcaacgatcagggggcctcgatt
cagttgcccaacgctgcgcaattttccgacttcaacggcccgcaggagaaatcctggcag
gtgcgttacgacgtgtcgctggcgacttacggcgtgcccggcctgaccttcatgagccgc
tacgtgcgcgggtggggcatcgatggcagccacattgccgccacaggcccttattccggg
cgctacggcgacgatggcaaacatcacgaaaccaatctggaagtgcgctacatcgtccag
tccggccccgccaaaggtttgagtgtgcgggcgcgccaagcctggcatcgggcgaacagc
gaccagggctcgggcaacctcgacgacttccggctgattaccgattaccccatcgacatt
ttgtga
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