Pseudomonas taetrolens: NCTC10697_02484
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Entry
NCTC10697_02484 CDS
T08085
Symbol
fecI_3
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10697_02484 (fecI_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptae03021
]
NCTC10697_02484 (fecI_3)
Transcription machinery [BR:
ptae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC10697_02484 (fecI_3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_11
PhyR_sigma-like
HTH_29
HTH_28
HTH_38
RovC_DNA-bd
TnsD
HTH_24
HTH_36
HTH_7
HTH_Tnp_ISL3
HTH_40
Xre-like-HTH
DUF6362
DUF8040
DUF1804
HTH_31
HTH_Mga
HTH_17
Motif
Other DBs
NCBI-ProteinID:
SQF86713
LinkDB
All DBs
Position
1:complement(2670813..2671322)
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AA seq
169 aa
AA seq
DB search
MTDASTPTEQTLHALYRDHSSWLENWLRRRMGNAWDAADLSQDTFVRVLASSRQLSDLRE
PRAYLLTVGKRLLSNFYTRRSLERAYLEALAQLPEDCVPSAEQRWVLLETLQALDELLDG
MPAAVRRAFLWSQLEGLGYREIAERLQVSERTVKRYMAQAYEHCLLVDC
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcatcgacgccaacggagcagaccctgcatgccctgtaccgcgatcacagc
agttggctggaaaactggctgcgacgacgcatgggcaatgcctgggatgcggcagacctt
agccaggacacctttgtgcgggtacttgccagctcccggcaactgtcagatctgcgtgaa
ccgcgggcttacctgctgacggtcggcaaacgtctgctcagcaatttttacacgcgccga
agcctggaacgggcctatctggaggccctggcgcagttgcctgaagactgtgtgccgtct
gcggagcagcgttgggtgctgctggaaaccctgcaggccctggacgaattgctcgatggc
atgccggcggcggtacgtcgtgcgtttctctggagccagctcgaagggcttggctaccgc
gaaatcgctgaacggttgcaagtctcggagcgtacggtcaaacgctacatggcgcaggcc
tacgagcattgcctgctggtggactgttga
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