Pseudomonas taetrolens: NCTC10697_02868
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Entry
NCTC10697_02868 CDS
T08085
Symbol
polC_4
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03030
DNA replication
ptae03430
Mismatch repair
ptae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10697_02868 (polC_4)
03430 Mismatch repair
NCTC10697_02868 (polC_4)
03440 Homologous recombination
NCTC10697_02868 (polC_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptae03032
]
NCTC10697_02868 (polC_4)
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_02868 (polC_4)
Enzymes [BR:
ptae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10697_02868 (polC_4)
DNA replication proteins [BR:
ptae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10697_02868 (polC_4)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10697_02868 (polC_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
SQF87090
LinkDB
All DBs
Position
1:3094519..3095241
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AA seq
240 aa
AA seq
DB search
MIDLTARRDQRALDWSAKFQLLAQQAIHPGLKRYYEAGVISAQTPIEDVPLLAMDIETTG
LNPEAHNIVSIGLIPFTLQRIRCGESLYWVIKPPSGLNEKSVTFHHITHADILLAPSLPD
VVEPLLEAMAGKVIVVHYRNIERAFLDQALRNFLGEGLQFPVVDTMQLEARMHRKKRGWL
DSLLRRPQTSIRLADSRARYNLPPYHAHHALTDALATAELLQAQVAHHYAPSTPIEELWS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgattgatttaacagcacgtcgagatcagcgagcactggactggtcagccaaattccag
ttgttggcgcaacaggccattcacccaggtcttaaacgctattatgaggctggcgttatc
tctgcacagacgccgatagaggatgttccattgcttgcgatggacatagaaaccaccggc
ctcaaccccgaagcccacaatatagtcagcatcggcctgataccgtttacgctgcagcga
atacgctgtggtgagtcgctctactgggttataaagccgccatccggtttgaatgaaaag
tccgtaacgttccatcacatcacccatgccgatatcttgctcgccccctctttgcccgat
gtagtggaacccctgttagaggccatggcaggcaaagtcattgtggtgcattacaggaat
atcgaaagggcctttctggatcaggcgctgcgtaactttctgggagaaggactgcaattt
ccggtcgtagacacgatgcaactggaagcccgaatgcacagaaagaaacgagggtggctg
gacagtcttctgcgtcgtccccagacgtcgataaggcttgctgatagccgcgcccgctat
aacttgccgccctaccatgcccaccatgcattgactgatgcgctcgcaacggcggagtta
ttgcaggctcaagtcgcccatcattacgcgccctccacgcccattgaagaactgtggagt
taa
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