Pseudomonas taetrolens: NCTC10697_03352
Help
Entry
NCTC10697_03352 CDS
T08085
Symbol
fadD_4
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae00061
Fatty acid biosynthesis
ptae00071
Fatty acid degradation
ptae01100
Metabolic pathways
ptae01212
Fatty acid metabolism
ptae02024
Quorum sensing
ptae04146
Peroxisome
Module
ptae_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC10697_03352 (fadD_4)
00071 Fatty acid degradation
NCTC10697_03352 (fadD_4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC10697_03352 (fadD_4)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC10697_03352 (fadD_4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ptae01004
]
NCTC10697_03352 (fadD_4)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptae04147
]
NCTC10697_03352 (fadD_4)
Enzymes [BR:
ptae01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC10697_03352 (fadD_4)
Lipid biosynthesis proteins [BR:
ptae01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC10697_03352 (fadD_4)
Exosome [BR:
ptae04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC10697_03352 (fadD_4)
Exosomal proteins of breast cancer cells
NCTC10697_03352 (fadD_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
SQF87558
LinkDB
All DBs
Position
1:complement(3590682..3592373)
Genome browser
AA seq
563 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDMTAFTSVVDVFERSCKKFADRPAFSNLGVTLTYAELERHSA
AFAGYLQQHTDLKPGDRIAVQMPNILQYPIAVFGALRAGLVVVNTNPLYTSREMRHQFQS
ADIRALVYLNMFGKRVEEVLQDTEIEYLIEARMGDLMPAAKGWITNLVVDKVKKLVPAYR
VPRAIPFKSALHRGSGQVIRPLTVTLDDIAVLQYTGGTTGLPKGAMLTHGNLVANMLQVR
ACLSQHDDDGLPILKDGREIMVAPLPLYHIYAFTANCMCMMVTGNHNVLITNPRDIKGFI
KELRNWRFTALLGLNTLFVALMDHPDFKTLDFSGLKVTNSGGTALVKATAERWEKLTGCR
IVEGYGLTETSPVASANPCGSLARLGTVGMPVPGTAMKVISDDGIDLGLGERGELCVKGP
QVMKGYWRNPQATAEVLDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE
DIVMAHPKVANCAVIGVPDERTGEAVKLFVVAREGGVSIEELTAYCKDNFTGYKVPKQIE
LRSSLPMTPVGKILRRELRDITS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgccccgccggtgtcccgctggacatcgatatg
acggccttcacctcggtcgtcgatgtgtttgaacgctcctgcaagaagttcgctgaccgt
cctgccttcagtaaccttggcgtgaccctgacctacgccgagcttgagcgtcacagcgcc
gcgtttgccggatacctgcaacagcacactgatctcaagcccggtgatcgcattgccgtg
caaatgcccaatatccttcaataccccatcgccgtatttggcgcgctgcgggcaggcctg
gtggtggtcaataccaatccgctgtatacctcgcgtgaaatgcgccatcagttccaaagc
gctgatatccgtgcgctggtgtatttgaatatgttcggcaagcgcgtggaggaggtgctg
caggacaccgaaatcgagtatttgatcgaagcccgtatgggtgacctgatgcctgccgcc
aaaggctggatcaccaacctggtggtcgataaggttaaaaagctggtgcctgcttatcga
gtgccccgggcaataccgtttaaaagtgccttgcatcgaggttcgggtcaggtcatccgt
ccgctgacggtgacactcgatgacatcgccgttctgcaatataccgggggtaccaccggg
ttgccgaaaggcgcgatgctgacccatggcaacctggttgccaacatgctgcaggtgcgt
gcgtgtctgtcccagcatgatgacgatggcctgccgatccttaaagatggtcgcgaaatc
atggtggccccgttgccgctttatcacatctatgcctttacggcgaattgcatgtgcatg
atggtgacaggcaatcacaacgtattgatcactaacccgcgtgacatcaaaggctttatc
aaagagctgagaaactggcgttttaccgcgttgctggggcttaacacgctatttgtggcg
ctgatggatcaccccgacttcaagaccctggatttttccgggcttaaagtcaccaactcg
ggaggcacggctctggtcaaggccaccgccgaacgttgggaaaaactcaccggttgccgc
attgtcgaaggttacggcctgaccgaaacctcaccggttgccagcgccaacccctgcggc
tctctggccagactgggcacggtcggcatgccggttccaggcacggcgatgaaagtcatc
agtgatgacggcatcgatctgggcctgggcgagcgtggcgagctatgcgtaaaaggaccg
caggtcatgaaaggctactggcgcaatccgcaggccacggctgaagttctggacgctgaa
ggctggttcaagaccggtgatattgcggtgattgatcccgatgggtttgtgcgcatcgtt
gatcgcaaaaaagacctgatcattgtctcgggtttcaatgtgtaccccaacgaaattgaa
gacattgtcatggcgcatcccaaagtggcgaactgcgcagttatcggcgttcctgacgag
cgcacgggggaggcggtcaagttgtttgtggtcgcacgcgagggcggtgtgagcattgaa
gagctgacggcttattgcaaagacaacttcacggggtacaaggtaccgaaacagattgag
ttgcgtagttcattgcccatgacgcctgtgggcaaaatcttgcgccgcgagttgcgtgac
atcacctcgtag
DBGET
integrated database retrieval system
