Pseudomonas taetrolens: NCTC10697_03442
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Entry
NCTC10697_03442 CDS
T08085
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03030
DNA replication
ptae03430
Mismatch repair
ptae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10697_03442 (dnaE)
03430 Mismatch repair
NCTC10697_03442 (dnaE)
03440 Homologous recombination
NCTC10697_03442 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptae03032
]
NCTC10697_03442 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_03442 (dnaE)
Enzymes [BR:
ptae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10697_03442 (dnaE)
DNA replication proteins [BR:
ptae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10697_03442 (dnaE)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10697_03442 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
SQF87645
LinkDB
All DBs
Position
1:complement(3679690..3683211)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLIKTLAGMNMPAVAVTDQNNMCSLVKFYKAAMGGG
IKPICGADLWLSNKDPENAVSRISLLAMNGAGYRNLTELISRGFIDGQRNGQVIIEREWV
AEAAEGLIMLSAAKEGEIGVALISGNTEEAETLAREWMTVFPDRFYLEVQRTKRPNDEEH
LHAAVALAEKVGAPLVATNDVRFLRQQDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPEALENSVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFDGL
EERLSVLLPRDTTEDYDSKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKSNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
AEKYGRNAVSQIITFGSMAAKAVIRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLV
TQFDKDDVESAGLVKFDFLGLRTLTIIDWALKTINRERAKVDEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCANNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNASEYKFTVNDEGRIIYGLGAI
KGVGEGPVEAITEARQDGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPCFHDEP
KAYQASIDQNRAILLAAMEEAIKAAEQTARTHDSGHADLFGGLFVEEDSDVYGNHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEEARTSLAESLRLKVVHSALKGDQLRVLGDLFKQHRGACPITMEYTGEGARAT
LQFGETWRVDPADSLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctgcgcctgcacactgaatactccctggtcgatggcctg
gtgcggatcaaaccgctgatcaaaaccctggcaggcatgaacatgcctgccgtcgcggtg
accgatcagaacaacatgtgttctctggtcaaattctacaaagcagccatgggcggcggg
atcaagccgatttgtggtgctgatctgtggttgtcgaacaaggatccggaaaacgcggtc
agtcgcatcagtctgctggcgatgaacggtgcgggttaccgtaacctgaccgagctgatt
tcccgtggttttatcgacgggcagcgcaatgggcaggtgatcattgagcgcgaatgggtg
gctgaggctgctgaaggtttgatcatgctctcggcagccaaggagggtgaaatcggtgtt
gcgctgataagcggtaacaccgaagaggctgaaaccctggctcgcgagtggatgacggta
ttcccggatcgcttttatctggaggttcagcgtaccaagcgtcccaatgatgaagagcat
ttgcacgctgcggtcgcactggctgaaaaagtcggtgcgcctctggtggcgaccaatgat
gtgcgcttccttcgccagcaggatttcgaagctcacgagacccgtgtttgcattggtgag
ggccgtgcgcttgatgacccgcgtcgctccaagaactacagtgaccagcagtacctgaaa
agcgccgaagaaatggccgaactgttcagtgacttgcctgaggcgctggaaaactcggtt
gaaattgccaagcgctgcaatattgacgtcaagctgggcactcactttttgcccaacttc
ccgattcccgatggcatgaccatcgatgagtatttccgcaaggtgtcctttgacggtctg
gaagagcgcctgagcgttctcctgcccagagacaccaccgaggactacgactccaagcgt
caggtgtatgtagaccggctgaatttcgagctggatatcattatccagatgggcttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagagtaacggcgtgccagtt
ggcccgggtcgagggtcgggtgccgggtcgctggtggcgtatgttcagaagattactgac
cttgatccactggaatacgatctccttttcgaacgtttccttaaccctgaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgtgaccgggttattgagtacgtg
gccgaaaagtatggccgcaatgcggtcagccagatcatcaccttcggttcgatggccgcc
aaagcggtaatccgcgacgtagcgcgggtgcagggcaagtcctatggcctggctgatcgt
ctgtcgaagatgattccttttgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgcgacttcattaaggtcgatgaagaagcggccgaaatctgggaaatggcg
cgcaagcttgaaggcgtggtgcgtaacgtcggcaagcacgccggtggtgtggttatcgct
cccaccaagctgacagacttttcaccgatctactgcgatgaagagggcggtggccttgtc
acccagttcgacaaggatgatgttgagtcggcggggctggtgaagttcgacttcctcggc
ttgcgtacgctgaccattatcgattgggcgctcaagaccatcaatcgcgaacgggccaag
gtggatgagccgccgctggacatcgcgttcattcctctcgacgacaagccgacttatcag
ctgctgcaaaaagccgaaaccacggcggtgttccagcttgaatcccggggtatgaaagag
ctgatcaaaaagctcaagcccgactgtctggaagacttgattgcactggtggccctgttc
cgtccgggcccactgcagtcaggcatggttgatgactttatcaaccgcaagcacgggcgt
gccgaattggcatacccgcactccgactaccagtacgaaggtctcaagcctgttctggca
ccgacatacggcatcatcctgtaccaggaacaggtgatgcagatcgcgcaggtgatggcc
ggttacaccctcggcggcgctgacatgctgcgacgtgccatgggcaagaaaaaacccgag
gagatggccaagcagcgcggtggtttcattgaggggtgtgcgaacaacaacattgatgcc
gacctggcgggtaacatttttgacctggtggaaaaattcgccggttatggttttaacaaa
tctcactccgctgcttacggcctggtgtcgtaccagaccgcgtggctgaagacgcattac
cctgcgccgttcatggccgcggtactctcggcagatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcgcacgatgaagttgcgccttgatgcgcccgacgtgaacgcc
tcggagtacaagttcacggtaaacgatgaaggccggatcatttatggtctgggtgccatc
aagggtgtgggggagggtccggtcgaggcaatcaccgaagcgcgccaggacggtcctttc
aaggatctgttcgacttctgtgcccgggtagacctcaagcgaatcaacaagcgcacgctc
gacggtttgattcgcagtggcgcactggaccgtctgggcccttgttttcatgatgagccc
aaagcctaccaggccagtatcgatcagaaccgtgcgatcctgctggccgcgatggaagag
gcgatcaaggccgcagagcagacagcccgtacccatgacagcggtcatgccgacctcttt
ggtggcctgttcgtcgaagaagactccgacgtttatggcaaccatcgcaaagccaaggaa
ctgacactcaaggaacgcctgaaaggcgaaaaagacaccttgggcctatacttgaccggt
catccgatcgacgaatacgaaggtgaaattcgccgtttcgcccgtcagcgcatcatcgac
ctgaagccggcccgggacacccagaccgttgccggcatgatcatcgccctgcgcgtgatg
aagaacaagaaaggcgacaagatgggtttcatcacccttgacgatcgttcggggcggatt
gaagcttcgttgtttgctgaagccttccattcggcgcaatccttgttacagacagatgca
atggtggtggtcgagggcgaggtcagtaatgacgacttttccggcggcctgcgcctgcgg
gtcaaacgcgtgatgagcatggaagaagcgcgtacgagcctggccgagagtttgcgtttg
aaagtggttcattccgcgcttaaaggtgatcaattgcgcgtattgggcgacttgttcaag
cagcatcgcggagcctgcccgatcacgatggagtacaccggagaaggagcaagggctacg
ttgcagtttggcgagacctggcgagttgatccggcagacagcttgattcaagccttgcgt
gaccagtttgggcgagacaacgtcttcctccaataccgttga
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integrated database retrieval system
