Pseudomonas taetrolens: NCTC10697_03565
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Entry
NCTC10697_03565 CDS
T08085
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10697_03565 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptae03019
]
NCTC10697_03565 (rhlB)
Enzymes [BR:
ptae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10697_03565 (rhlB)
Messenger RNA biogenesis [BR:
ptae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10697_03565 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
SQF87767
LinkDB
All DBs
Position
1:3809593..3811083
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AA seq
496 aa
AA seq
DB search
MTVLKALKKIFGKSEAEPLAPASITPSSPPSPRTDAQQPGRSAPVQAPVITPDAQPAPEH
VHIEKPKAPKPRRDTAPKPPVIPWKLEDFTVEPQEGKTRFHDFKLTPELMHAIQDLGFPY
CTPIQAQVLGYTLSGRDAIGRAQTGTGKTAAFLISIISQLTQTPPPKERYMGEPRALIIA
PTRELVVQIAKDAADLTKYTDLNVMTFVGGMDFDKQLKQLEARHCDILVATPGRLLDFNQ
RGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKAERQTLLFSATFTEDVMNLAK
QWTTDPAIVEIEAQNVANELVEQHVYAVAGADKYKLLFNLVNDNGWERVIVFANRKDEVR
RIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKVRVLVATDVAGRGIHIDGISHVIN
FTLPEVPDDYVHRIGRTGRAGASGVSISFAGEDDSYQLPSIETLLGRKISCETPPTELLR
PVVRAVRKPKDPTETA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaaaaaaatattcggcaaaagcgaggctgagccactcgcg
ccagcttccattacaccttcgagcccacccagcccgcgtaccgacgcgcaacagcctggc
cgctccgctcctgtgcaagcaccggtgatcacgcccgacgcccagccagctcccgaacac
gtgcatatcgaaaaacccaaagcgccaaaaccacgacgcgatacggcaccaaaaccgccg
gtcatcccgtggaagctcgaagatttcaccgtcgagccgcaagaaggcaaaacccgcttt
catgatttcaagctcacccccgagctgatgcacgccattcaagacctcggattcccgtac
tgcacgccgatccaggcgcaagtattgggctataccctgagcggccgcgacgccattggc
cgagctcagaccggtaccggcaagactgccgccttcctgatctcgatcatcagccagctg
acccagaccccgccgcccaaagaacgctacatgggtgaaccgcgcgctctgatcatcgcg
ccgacccgtgaactggtggtgcaaatcgccaaagatgctgccgacctgaccaagtacacc
gacctgaacgtgatgacgtttgtgggcggcatggacttcgacaagcagctcaaacaactt
gaagcccgccattgcgacatcctggtggccacgccggggcgcctgctggacttcaaccag
cgcggtgaagtgcatctggacatggtcgaagtgatggtgctcgacgaagccgaccgcatg
ctcgacatgggtttcatcccgcaagtgcgtcagatcattcgccagacaccgcccaaggcc
gaacgccagacgctgctgttctctgcgaccttcaccgaagacgtgatgaacctggctaaa
cagtggaccactgacccggccatcgtcgaaatcgaagcgcagaacgtggccaacgagctg
gtggagcaacacgtctacgccgttgccggggctgacaaatacaaattgctgttcaacctg
gtgaacgataacggctgggagcgcgtgatcgtgttcgccaaccgcaaagatgaagtgcgt
cgcatcgaagaacgcctggtgcgtgatggcatcaacgccgcccagctgtcaggcgatgtg
ccgcaacacaagcggatcaaaaccctcgaaggcttccgcgaaggcaaggttcgggtgctg
gtagcgaccgatgtggcaggtcgagggattcacatcgacggcatcagccacgtgatcaac
ttcaccctaccggaagtcccggacgactacgtacaccgtatcggccgtacggggcgtgcc
ggcgcgagcggcgtctccatcagctttgccggtgaagacgattcgtaccagctgccatcg
atcgaaaccctgctgggccgcaaaatcagctgcgaaaccccgccgacagaactgctgcga
cctgttgtccgggctgtgcgcaagccgaaggacccgactgagaccgcgtga
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