Pseudomonas taetrolens: NCTC10697_03917
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Entry
NCTC10697_03917 CDS
T08085
Symbol
yfiN
Name
(GenBank) putative diguanylate cyclase YfiN
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCTC10697_03917 (yfiN)
Enzymes [BR:
ptae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
NCTC10697_03917 (yfiN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
GGDEF_GdpP
SMP_2
DUF7801
Motif
Other DBs
NCBI-ProteinID:
SQF88103
LinkDB
All DBs
Position
1:complement(4185940..4187214)
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AA seq
424 aa
AA seq
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MSQPKTPENRRHRLRSVLRRGHLGVALVAVTLASVSLTLLGTLALKVYADHNLQLIARAI
NYTVEAAVVFDDRAAATEALAMISSTEAVAKAEIYTAQGELLAQWQRPENGVMSKVEMLL
ANSLLEQPISVPIQHQGEEIGTVVVSVHGANMLSFLLGGVIGVMVCTALSVWSALYLSRR
LLGGITGPLQQLAEVAHAARCERAFDRRVPPADIAELDDLGNDFNALLDELESWQSHLQN
ENQTLAHQANHDSLTNLPNRGYFEARLARTLRSLHKPTEKAAVLFLDSDRFKDINDTFGH
AAGDAVLMAVATRVRGQLREDDVVARMGGDEFAILLTPLHRIEDAQRIADKIILSMLEPI
QLPGKTTAVTSLSIGIAVYPDHGADPDTLLRAADSAMYQAKRLARGGQQIAVLECPVNSV
ISRS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccaaaaacgcctgaaaatcgtaggcaccgtctgcgctcggtgttgcgcaga
ggtcacctgggcgttgcattggtcgccgtaacactggccagtgtctcgctcacattgttg
ggcactctggcgctcaaggtctacgctgatcacaacctgcagttgattgcccgtgccatc
aattacaccgtggaagcggccgtggtgttcgatgatcgggcggcggcgaccgaagcattg
gcgatgatttcgtccaccgaggcggtggccaaggccgagatctataccgcgcagggcgag
ttgctggcgcaatggcagcgtcccgaaaacggcgtgatgtcgaaggttgaaatgctgttg
gccaacagtctgcttgagcaaccgatcagcgtgcctatccagcatcagggtgaagagatc
gggacggtggtggtcagtgtgcatggcgccaatatgttgagctttttactcggtggcgtg
attggggtcatggtgtgcacagccttgagtgtatggagtgcgttgtacctgtcgcgccgt
ttgctggggggcatcaccgggccgctgcagcaactggccgaggtcgctcacgccgcacgg
tgcgaacgggcgttcgatcgtcgagtaccacccgccgatatcgcggagctggacgacttg
ggcaacgacttcaatgcgttgctcgatgagctggaatcatggcaaagccacttgcagaac
gaaaaccagaccctggcgcaccaggccaatcatgactcgctgaccaatctgcccaatcgc
ggctactttgaagcgcggctggcgcgtacgttgcgttcgctgcacaaacccaccgaaaaa
gctgcggtgctgtttctcgacagcgaccgttttaaggacatcaacgacaccttcggtcat
gccgcgggcgatgcggtgttgatggcggtggcgacgcgggttcgcggtcagctgcgcgaa
gatgatgtggtggcgcgcatgggaggtgacgagtttgcaattctcctgaccccgctgcac
aggatcgaagacgctcaacggattgctgacaaaatcatcctcagcatgcttgagccgatt
caattgcccggtaaaaccacggcagtgacctcgcttagcattggtattgccgtttatccc
gaccatggagcagacccggatacgttgctgcgtgcggcagactcggcgatgtaccaggcc
aaacgcctcgctcgaggcggacaacagatcgcggtgctggagtgccccgttaattccgtt
atttccaggagctag
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