Pseudomonas taetrolens: NCTC10697_04316
Help
Entry
NCTC10697_04316 CDS
T08085
Symbol
dctD_3
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
KO
K10126
two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC10697_04316 (dctD_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ptae02022
]
NCTC10697_04316 (dctD_3)
Two-component system [BR:
ptae02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
NCTC10697_04316 (dctD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_50
AAA_2
HTH_8
FleQ
AAA
DUF6716
AAA_16
DUF4250
HTH_35
Motif
Other DBs
NCBI-ProteinID:
SQF88491
LinkDB
All DBs
Position
1:4644472..4645866
Genome browser
AA seq
464 aa
AA seq
DB search
MSQPIDPRVQIILIDDDPHLRQALYQTLDLAGLKVLPLAEATGLAERIERNWPGVVVSDI
RMPGMDGLELLAQLHGQDPDLPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLDSV
RRALALRALVLDNRSLRLALSDRQQLSTRLVGLSPAMLRLREQIGALAATKADVLILGET
GSGKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEF
ANGGTLFLDEIESMSLDVQVKLLRMLQERVVERLGGNQLIALDIRVIAATKEDLRQAADQ
GRFRADLYYRLNVAPLRIAPLRERGEDVLMLFKYFADEASIRHGMPPNVLQPAQRALLLR
HTWPGNVRELQNVAERFALGLELALDESHDEAMQAFMPEASGGLSEQVEQFEKSLIAAEL
ERSHSSMRSLAEALGVPRKTLHDKLRKHGLNFESGNNSHTDDLD
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacccatcgatccgcgcgttcagatcatcctgatcgatgatgacccgcacctg
cgccaggcgctgtatcaaaccctcgacctcgcgggcctcaaggtgctgccactggccgaa
gccaccggtctggccgagcgcattgaacgcaactggccaggcgtcgtggtgagtgacatc
cgtatgccgggcatggacggccttgagttgctggcccagttgcacggccaggacccggat
ctgcccgtgttgctgatcaccggccatggtgacgtcccgctggccgtgcaggccatgcgt
gccggcgcctacgactttcttgaaaaacccttcgccagcgacgccttgctcgacagcgta
cgccgggcactggccctgcgtgccctggtgctggacaaccgcagcctgcgcctggccttg
agcgatcgccagcaattgagcacacgcctggtaggcctgtcaccggccatgttgcgcctg
cgtgagcaaatcggtgccctggcggcgaccaaggccgacgtgttgattctgggcgaaacc
ggctctggcaaagaggtcgttgcgcgagcgctgcatgacttgtccagccgccgcaacggc
ccgttcgtggcaatcaatgccggtgcgctggccgaatcggtggttgaaagcgagctgttc
ggtcatgaacccggagcctttaccggtgcgcaaaaacgccgtatcggcaagttcgaattt
gccaatggcggcacgctgtttctcgacgaaattgaaagcatgagcctggacgtgcaggtc
aagttactgcgcatgctgcaagagcgggtggtcgagcgcctggggggcaaccaactgatt
gcgctggatatccgggtgatcgccgccaccaaggaagacttgcgtcaggcggccgatcag
ggccggttccgcgctgacttgtattaccgtctcaacgttgcgccgttacgcatcgcaccc
ttgcgcgaacggggtgaagacgtgctgatgctgttcaaatactttgccgacgaagccagc
atccgccatggcatgccccccaatgtgctgcagccggcacagcgtgcgctgttactgcgc
catacttggcctggcaacgtgcgcgaactgcagaacgtcgccgaacgttttgctcttggg
ctggaactggccctcgatgaaagccatgacgaggccatgcaggcgttcatgcccgaggct
tcgggcggcctgagcgagcaggttgaacagttcgaaaagagcctgattgctgccgaactc
gaacgctctcacagctcaatgcgcagcctggccgaagccttgggtgtgccacgcaaaacc
ttgcatgacaagctgcgcaaacacggattgaattttgagagcggcaataatagccacact
gatgatctcgattaa
DBGET
integrated database retrieval system
