Pseudomonas taetrolens: NCTC10697_04454
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Entry
NCTC10697_04454 CDS
T08085
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptae
Pseudomonas taetrolens
Pathway
ptae03420
Nucleotide excision repair
ptae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10697_04454 (uvrD)
03430 Mismatch repair
NCTC10697_04454 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptae03400
]
NCTC10697_04454 (uvrD)
Enzymes [BR:
ptae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10697_04454 (uvrD)
DNA repair and recombination proteins [BR:
ptae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10697_04454 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC10697_04454 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
AAA_11
RHH_1
Motif
Other DBs
NCBI-ProteinID:
SQF88616
LinkDB
All DBs
Position
1:4802761..4804944
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVTASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSVL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPKHIQASGDLFLATMRNIYEAYE
VACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSTDFPDAETIRLEQNYRSTAGILKAANALIA
NNSGRMGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLAHSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLIANKALPGRASGAIAGFIELIENLSAKVMEMPLH
LMTQTVIEQSGLIAYHQAEKGEKGQARVENLEELVSAARNFESNDEDEELSPLAAFLGHA
SLEAGDTQAEEHEDGIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMHNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
KQSASTLFGGSEIPETEFKLGQMVKHAVFGEGVILNFEGAGAQARVQVNFSEGSKWLMMG
YAKLEAV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctcttgttaaattccctcaacgatgcccaacgtcaggccgtc
acggccagtgtcgggcgtcagttggttctggccggcgcaggttccggcaaaacccgtgtg
ttggtgcaccgtatcgcctggttgatccaggtcgaaaacgcctccccgcactctgtgctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgaacagctcatg
ggcatcaacccggccggcatgtgggtaggcaccttccacggcctcgcacatcgtctgctg
cgggcgcactggcaagaagccgggctgagccagaccttccagattctcgacagcgatgac
cagcaacgcttggtcaaacgtgtgattcgtgaactcgggctggacgaacaacgctggcca
gtgcgtcaggcgcaatggtttatcaacggtcaaaaagacgaaggtctgcgccctaaacat
attcaagccagcggcgacttgttcctggccaccatgcgcaacatctacgaagcctacgaa
gttgcatgccaacgcgcaggcgtaatcgacttctctgaactgctgttgcgtgccctggac
ctgtggcgtgaccatccgggcttgctggcgcattaccagaagcgtttccggcatattctg
gtggacgaattccaggataccaacgccgttcagtatgcgtggctacgattactggccaag
ggcggcgacagcctgatggtcgtaggggatgacgaccaatcgatttatggctggcgcggc
gccaagattgagaacatctaccagtactcgaccgacttcccggatgccgaaaccatccgc
ctggagcaaaactatcgctccaccgccggtatcctcaaagcggccaacgccctgattgcc
aataacagcggacgtatgggcaaagagctgtggaccgacggcggcgaaggcgaagcaatc
aatctatacgcggccttcaacgaacatgacgaagcacgttacgttgtcgaaaccatcgaa
agcgccctgaaaaccggtcttgctcacagcgatatcgctattttgtaccgctccaacgcc
caatcacgtgtgcttgaagaagcgctgctgcgtgagcgtattccgtaccgtatttacggt
ggccaacgcttcttcgagcgggcggaaatcaaaaatgccatggcttatatgcgcctgctg
gaaggtcgaggcaatgacgccgctctggagcgggtcatcaacgtaccggctcgcggcatc
ggtgaaaaaaccgtcgaagccattcgcgaacacgctcgacacagcgatgtgtcaatgtgg
gaagcgatgcgccaactgatcgccaataaagccctgccaggtcgcgcttcgggtgccatc
gccggctttatcgaactgatcgaaaacctgtcggcaaaagtcatggagatgcctctgcat
ctgatgacccaaaccgtgatcgaacaaagcgggctgattgcctaccaccaggcggaaaaa
ggcgaaaagggccaggcccgggtagagaaccttgaggaactggtcagcgcggcgcgcaac
ttcgaaagcaatgacgaagacgaagaactgtcgcctctggcggctttcctcggtcacgcc
tcgctggaagccggtgacacccaggctgaagaacatgaagacggcatccagttgatgacg
ctgcacagcgccaaagggctggaatttccatatgtgttcctggtcggcatggaagaaggt
ctgttccctcacaagatgagtctggaagaacccggccgccttgaagaagaacgccgtctg
gcctacgtgggcatcactcgggccatgcacaatctggtcatgacttatgctgaaacccga
cgcttgtacggtagcgaaacctataacaaggtttcgcgtttcgtacgcgaagtacccaaa
ggtctgattcaggaagttcggctttccaacagcgtcagccgtcctttcggcggcggccaa
aagcaaagcgccagcactttgtttggcggatcagagatccctgaaaccgaattcaaactc
ggtcagatggtgaagcatgccgtgtttggtgaaggcgttatcctcaactttgagggcgct
ggcgctcaagcgcgggtgcaagtcaacttctccgaaggcagcaagtggctgatgatgggc
tatgccaaacttgaggctgtctga
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