Pseudomonas taiwanensis: ICN73_03730
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Entry
ICN73_03730 CDS
T09297
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ptai
Pseudomonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptai03000
]
ICN73_03730
Transcription factors [BR:
ptai03000
]
Prokaryotic type
Helix-turn-helix
Other families
ICN73_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
PAS_9
AAA_5
PAS_4
HTH_AraC
HTH_50
AAA_2
PAS_8
HTH_7
HTH_23
HTH_22
HTH_AsnC-type
RWP-RK
HTH_17
HTH_30
Mga
HTH_26
AAA
HTH_IclR
HTH_10
HTH_28
MCM
HTH_3
HTH_11
ANT
DUF7726
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
QOJ92002
UniProt:
A0A7L9GI17
LinkDB
All DBs
Position
complement(829056..831071)
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AA seq
671 aa
AA seq
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MQSNHFTRHARQVHSVAHGGAGEGGSDPSIARSWLRCLEDYHLDPAVIEAPVVLEHGRLL
ESRERLHQVLQIADHEMNSLHQQLSGAGHAVLLTDARGVILNCVSAPAERRSFERAGLWL
GADWSEAREGTNGIGTCLVERQALTIHQNEHFRGRHTGLTCSASPVFDPHGDLLAVLDVS
SARPDVSRQSQFHTMALVNLSAKMIESCYFLRHFEQQWLLRFHLQAESVGLFSEGLLAFD
GDGRICAANQSALNLLGTVRGGVLGKPLACFFACSHDEMFSRATPGGSTAWPLRTLDGRQ
VFASLRGQARAPVWSVPAAQPRPAGEVEPLVCLLDPALQNDFRRSVRVFERDVPLLLRGE
TGCGKEAFAQAVHQASERRGKPFVAINCASIPESLIESELFGYRGGSFTGARKEGMRGKL
LQADGGTLLLDEIGDMPLALQTRLLRVLEERQVVPIGGEPQAVDVRIVSATHRDLLERVE
QGSFREDLYYRLNGLEVALPAVRERSDKAQLLDFLLRQETQGQRIDIEPRARQALLAFNW
PGNVRQMRNVLRTLVALCEDARITFTDLPAVIRTSPPPVGAGEPAKISDQAIEGEGVALV
RGQARSHRSGGAAEIEGESVGTEVLLDAERQALKEVLEAKHWHLTRVAEHLGISRNTLYR
KLRKHGITRGD
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcaatcacttcacgcgccatgcccggcaggtgcatagcgttgcccatggtggg
gccggggagggcggcagtgacccgtccatcgcccgctcctggctgcgctgcctggaggat
taccacctcgacccggcggtgatcgaagcgccggtggtgcttgagcatgggcgcctgctg
gaaagccgcgagcgcctgcatcaggtgctgcaaattgccgaccatgaaatgaacagcctg
caccagcagctttccggcgcaggccacgcggtgctgctgaccgacgcccgcggggtgatc
ctcaattgcgtcagtgcccccgccgagcggcgcagcttcgagcgtgccgggctgtggttg
ggcgctgactggagcgaggcgcgcgagggcaccaatggcatcggcacctgcctggtcgag
cgccaggcgctgaccatccatcagaacgagcacttccgtggccgtcacaccgggctgacc
tgctcggccagcccggtgttcgacccgcatggcgacctgctggcggtactcgacgtgtcc
tctgcgcgccccgacgtatcgcggcaaagccagttccacaccatggcgttggtcaacctg
tcggcaaagatgatcgaaagctgctatttcctgcgccatttcgagcagcaatggttattg
cgttttcacctgcaagccgagtcggtcggcctgttcagcgaaggcttgctggcgttcgac
ggcgatgggcgcatttgcgctgccaaccaaagcgcactgaacctgctgggcacggtacgg
ggcggcgtgctgggcaaaccgttggcgtgctttttcgcgtgcagccatgacgaaatgttc
agccgtgccacgcccggcggcagtactgcctggccgctgcgcaccctggacggtcgccag
gtgttcgccagcctgcgggggcaggcccgggcgccggtgtggtcggtgccggccgcccag
ccgcggcccgcaggtgaagtggagccgctggtctgtctgctggaccctgcgttgcaaaat
gatttccgccgcagcgtgcgggtgttcgagcgcgatgtgccattgctgctgcgcggcgag
accggctgtggcaaggaggccttcgcccaggctgtgcatcaggccagtgagcggcgcggc
aagccgttcgtcgccatcaactgcgcttctattccggaaagcctgatcgagagtgagctg
ttcgggtaccgcggcggcagttttaccggcgcgcgcaaggagggcatgcgcggcaagctg
ttgcaggccgacggcggcaccttgctactggacgagatcggcgatatgccgcttgccctg
caaacccgactgctgcgggtactggaggagcgccaggtggtgccgatcgggggagagcca
caggcggtggacgtgcgcatcgtcagcgctacgcaccgtgacctgctggaacgggttgaa
cagggcagtttccgcgaggacctgtattaccgcctcaatggcctggaggtagcgctgccg
gcggtgcgcgaacgcagtgacaaggcgcagttgctggactttctgctacgccaggagacg
caggggcaacgcatagacatcgagcccagggcgcggcaggcgctgctcgcatttaactgg
ccggggaacgtgcggcagatgcgcaatgtgctgcgtaccctggtggcgctttgcgaagat
gcccgcatcacctttacggacctccccgcagtcatccgcaccagcccacctcccgtgggg
gcgggcgagcccgcgaagatatccgaccaggcaatagagggcgagggcgttgccctcgtt
cgcgggcaagcccgctcccacaggtccggcggtgccgcagagatcgagggtgaatctgta
gggaccgaggttctgctcgacgcggagcggcaagcgctgaaggaggtcctggaggcaaaa
cactggcatctcacccgcgttgccgagcacttgggcatcagccgcaataccttgtatcga
aaactgcgcaaacacggcattaccaggggcgactga
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