Pseudomonas taiwanensis: ICN73_07265
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Entry
ICN73_07265 CDS
T09297
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptai
Pseudomonas taiwanensis
Pathway
ptai00300
Lysine biosynthesis
ptai00470
D-Amino acid metabolism
ptai01100
Metabolic pathways
ptai01110
Biosynthesis of secondary metabolites
ptai01120
Microbial metabolism in diverse environments
ptai01230
Biosynthesis of amino acids
Module
ptai_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ICN73_07265 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ICN73_07265 (dapF)
Enzymes [BR:
ptai01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ICN73_07265 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
QOJ92670
UniProt:
A0A7L9GJG7
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Position
complement(1611503..1612333)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPNNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKSGIIVLDVQNDGQVSVNM
GPPRFIPAEIPFVADAQAPSYPLEVDGQLYSIAAVSMGNPHAVLRVDDVSTAPVHELGPK
IENHPRFPQRVNAGFIQVIDRHRANLRVWERGAGETQACGTGACAAAVAAISQGWMDSPV
SLDLPGGRLHIEWAGPGKPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatgggctgggcaacgacttcatggtcctggacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcaatggggtgaccgtcacacc
ggcatcggctttgaccagttgctgatcgtcgaggcgccgaacaacccggaagtggacttc
cgctaccgcatcttcaacgccgacggctccgaggtcgagcaatgcggcaacggtgcgcgc
tgctttgcccgctttgtgctggacaagcgcctgaccgccaaaaagcgcatccgcgtggaa
accaagagcggcatcatcgtgctggacgtgcagaacgacggccaggtgagtgtcaacatg
ggcccgccgcgcttcatccctgccgaaattccctttgtcgccgacgcacaggcgccaagc
tacccgctggaagttgacggccagttgtactcgatagccgccgtgtccatgggtaacccg
cacgccgtgctgcgtgtcgacgacgtgtctactgcgcctgtgcatgagctgggcccgaag
atcgaaaaccacccacgcttcccacagcgggtgaatgccggcttcattcaagtcatcgac
cgccaccgcgccaacctgcgcgtgtgggaacgcggcgccggcgaaacccaggcttgcggc
accggcgcctgcgccgcagccgtggcggcgatcagccagggctggatggattccccggtg
tccctcgacctgcccggtggtcgcctgcacatcgaatgggccggccccggcaagcccgtg
atgatgaccggcccggccgtacgcgtctacgaaggacaggttcgtctctaa
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