Pseudomonas taiwanensis: ICN73_10450
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Entry
ICN73_10450 CDS
T09297
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ptai
Pseudomonas taiwanensis
Pathway
ptai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ICN73_10450 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptai03400
]
ICN73_10450 (recB)
Enzymes [BR:
ptai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ICN73_10450 (recB)
DNA repair and recombination proteins [BR:
ptai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ICN73_10450 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_25
PHBC_N
Motif
Other DBs
NCBI-ProteinID:
QOJ93259
UniProt:
A0A7L9GL61
LinkDB
All DBs
Position
2327986..2331660
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AA seq
1224 aa
AA seq
DB search
MTQDRPLALSFPLHGSQLIEASAGTGKTFTISALYLRLILGHGGEQGFERELLPPQILVV
TFTDAATKELRERIRARLAEAARFFRGELEGADPLLHQLRDDYPQETWPRCAGRLEIAVQ
WMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSELLGQVMRDYWRRFCYGMQGDA
LAWVRGNWGSPDALLPRIRPLFGRVRAQQNGPEPAALIQASLQQRGAQLARIKAPWAQWA
EELRQICRDALAAKQVDGRKMQARYFEPWFDKLCAWASDEQLVELDLGTGFTRLTPAGMA
EAWKGEPPEHPALNAMQHLQQQLQALDSPDAPLLEHAASWVSARFEVEKRRRAEMGFDDM
LVRLQHALASEAGERLASLIREQFPVALIDEFQDTDPVQYGIFERIYQISENRAETGLFM
IGDPKQAIYAFRGADIYTYLAARRATSGRLHSLDTNYRSSKAMVEAVNQVFLQAEAREAG
RGAFLFREADDNPLPFIEVRAKGRGEQLLIDGEVSAALQCWQLESEEPVSSSVYRQQLAA
SCASHIVALLNGGQQGTAGFQNAEGELRACLPSDIAILVRDGHEAQMVRAELAAREVRSV
YLSDKDSVFAAQEAHDLLAWLKACAEPDSERLLKAALASLTLGLSLAALDRLNQDERVWE
SWVMRFRLYRDTWQRQGVLPMLRHLLHDFQLPRTLIRRSDGERVLTNLLHLAELLQQAAG
ELDGEQALIRHLAEHLASSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVYLPFICT
SKPVDGSRLPLAWHDSEGNAHLTLTPDEEQIERADDERLAEDLRLLYVALTRAQHACWLG
VADLKRGNQKSSQLHRSAFGYLLGGGLALAGSAQLTDWLQTLAAKCPHITCPGLPQADEQ
IYRMPHAERELLPARRPRHAAAEHWWIASYSALRVGDQTLGADSSQAQQLLDDEVPDAQV
LREVPADSGDIHRFPRGPNPGTFLHGLLEWAGREGFSEVSGNPQLIERTVGQRCNRRDWA
GWIPTLSHWMQRLLGEALPLPGSDQSVTLGQLRHYQIEMEFWFASHRVDAEQLDRLVARH
THPGLARPAAQPTVLNGMFKGFIDLAFELDGRYYVTDYKSNWLGADIQAYDAMAMEKAIL
EHRYDLQYVLYLLALHRQLRARLADYDYDRHVGGALFIFLRGASSSGHGVYHAKPPRELI
ESLDALFRGEHAPVQQDLFAGVAP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaccgtcctctggcactgagtttccccctgcacggtagccagctgatcgag
gccagcgccggcacgggcaagaccttcaccatttcggcgctgtacctgcgcctgatcctc
ggtcacggtggcgaacagggcttcgagcgcgagctgctgccaccgcagatccttgtggtg
accttcaccgacgccgcgaccaaagagctgcgcgagcgtatccgcgcccgcctggctgaa
gccgcacggttcttccgtggcgagctggaaggcgccgatccgctgttgcaccaactgcgt
gacgattacccacaagagacttggccgcgttgcgccggccggttggaaatcgccgtgcag
tggatggacgaggctgcggtatcgaccatccatggctggtgccagcgcatgctgcgcgag
catgccttcgacagcggcagcctgttcacccagaccctggaaaccgaccacagcgagttg
ttgggccaggtcatgcgcgattactggcgacgcttctgctatgggatgcaaggtgacgca
ctggcctgggtgcgcggcaactgggggagccccgacgctttgctgccacgcattcgccca
ctgttcggccgtgtgcgcgcccagcagaatgggccagagcccgctgcattgatccaggca
tcgctgcagcaacgtggcgcacagttggcccggatcaaggcgccatgggcacagtgggcc
gaggaactgcggcaaatctgccgcgatgcgctggccgccaaacaggtcgacggccgcaag
atgcaagcccgttacttcgagccctggttcgacaagctctgcgcttgggccagcgatgag
caactggtagagctcgacttgggcaccggctttacccggctgaccccggcgggcatggcc
gaggcctggaagggagaacctcccgagcacccagccctcaacgccatgcagcacttgcag
caacaactgcaggccctggacagcccggatgcccctctgctcgagcacgcggccagttgg
gtatcggcacgtttcgaagtggagaagcgccggcgtgcagaaatgggcttcgacgacatg
ctcgtgcgcttgcagcacgcactcgccagcgaggccggcgagcgcctggccagcctgatc
cgtgagcagttcccggtagcgctaattgacgaattccaggacaccgacccggttcagtac
ggcattttcgagcgcatctaccagatcagtgaaaaccgcgccgaaaccggtctgttcatg
atcggggaccccaaacaggcgatctacgccttccgcggtgccgacatttacacctacctt
gcggcgcggcgcgccaccagcggccgtctgcacagcctggacaccaattaccgctccagc
aaagccatggtggaggcggtcaaccaggtgttcctgcaggccgaggcgcgtgaagcgggg
cggggtgcattcctgttccgcgaggccgatgacaacccgctgccattcatcgaggtgcgc
gccaaggggcgtggcgaacagctgctgattgacggtgaagtcagtgcagccctgcaatgc
tggcagctggaaagtgaagagccagtctccagcagcgtctaccgccagcaactggctgct
agctgcgccagccatattgtcgccttgctcaatggcggccagcagggcacggcgggtttc
cagaatgccgaaggcgaattgcgcgcctgtctgccctcggacatcgccatcctggtgcgc
gatggtcatgaggcgcagatggtccgcgccgaactggccgcacgcgaggtgcgcagcgtc
tacctgtccgacaaggactcggtgtttgccgcccaggaagcccacgacctgctggcctgg
ctgaaggcctgcgccgagcctgactcggagcgcctgctcaaggctgctctggccagcctt
acactgggcctgtcgctggctgcgctggaccggcttaaccaggacgagcgggtctgggaa
agctgggtgatgcgttttcgcctgtaccgcgacacctggcagcgccagggggtgttgccg
atgttgcgtcacctgctgcatgacttccagctaccgcgtacgctgatccgccgcagtgat
ggcgagcgggtgctgaccaacctgctgcacctggccgagctgctgcagcaggccgctggc
gagctggacggcgaacaggcgcttatccgccacctggccgagcacctggccagttccggt
caggccggtgaagagcagatcctgcgcctggagagcgacgaacagttggtcaaggtggtg
accatccacaagtccaagggcctggaatatcccttggtctacctgccattcatctgcacc
agcaaaccggtggatggtagccgtctaccgctggcctggcatgacagcgaaggtaacgcc
cacctcaccctcacacctgacgaggagcagatcgagcgcgctgacgacgagcgcctggcc
gaagacctgcgcctgctctacgtggccctgacccgtgcccagcatgcatgctggctgggt
gtcgccgacctcaagcgcggtaatcagaagagctcgcagctgcatcgctcggcgtttggc
tacttgctggggggcggcctggccctggctggctcggcgcagctgacggactggttgcag
acgttggcggcgaagtgcccgcacatcacttgcccaggcctgccgcaggcggatgagcag
atatatcgcatgccacacgccgagcgtgaactgctgccggcacgcaggccacgccatgcg
gctgccgagcactggtggatcgcttcgtacagtgcccttcgtgtcggcgatcagaccctc
ggcgccgacagctcgcaggcccagcaactgctggatgacgaggtgcccgatgcccaggtg
ttgcgcgaggtccccgccgacagcggcgatatccatcgcttcccgcgggggcctaacccc
ggcaccttcctccatggtttgctggagtgggcaggccgtgagggcttcagcgaggtcagc
ggtaaccctcagctgatcgagcgtaccgttggccagcgctgcaatcgccgtgactgggcc
ggctggatccccaccctgagccactggatgcaacgtttgctgggcgaggcgttgccgctg
ccgggcagcgaccagagcgtaacgctgggccagctgcgtcattaccagatcgaaatggaa
ttctggttcgccagccaccgggtcgacgcagaacaactcgatcgcctggtggcacgccac
acccaccccggtctggcgcgcccagctgcgcagccgactgtgctaaacggcatgttcaaa
gggttcatcgacctggcgttcgagctggacgggcgttactacgtgaccgactacaagtcc
aactggctgggtgcggacatccaggcctacgatgccatggccatggaaaaggcgattctt
gagcaccgctacgacctgcagtatgtgctgtacctgctggccctgcaccgccagttgcgc
gcgcggctggcggactacgattatgaccgccatgttggcggcgccctgttcatcttcctg
cgcggtgccagcagcagcggccacggcgtgtaccacgccaagccaccgcgtgagctgatc
gaaagcctcgatgcactgttccgtggtgagcacgcgccagtacagcaggacctgtttgcc
ggagttgcgccatga
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