Pseudomonas taiwanensis: ICN73_16825
Help
Entry
ICN73_16825 CDS
T09297
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptai
Pseudomonas taiwanensis
Pathway
ptai00260
Glycine, serine and threonine metabolism
ptai00460
Cyanoamino acid metabolism
ptai00630
Glyoxylate and dicarboxylate metabolism
ptai00670
One carbon pool by folate
ptai00680
Methane metabolism
ptai01100
Metabolic pathways
ptai01110
Biosynthesis of secondary metabolites
ptai01120
Microbial metabolism in diverse environments
ptai01200
Carbon metabolism
ptai01230
Biosynthesis of amino acids
ptai01240
Biosynthesis of cofactors
ptai04981
Folate transport and metabolism
Module
ptai_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ICN73_16825
09102 Energy metabolism
00680 Methane metabolism
ICN73_16825
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ICN73_16825
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ICN73_16825
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ICN73_16825
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ICN73_16825
Enzymes [BR:
ptai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ICN73_16825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QOJ89529
UniProt:
A0A7L9GB27
LinkDB
All DBs
Position
complement(3743955..3745226)
Genome browser
AA seq
423 aa
AA seq
DB search
MTHSYFNDNLAERDPLVFKALQGEKKRQQGQIELIASENSVSLACLEALGSVITNKSVEG
YPGKRFHGGADFADVVEQAAIDRAKDLFGCNFVNAQPHSGTQANQAVFFALLQPGDTVLS
MDLASGGHLSHGAKPNQSGRWFNIVSYGVERETGLIDYANLEALASEHKPKLIIAGGSSY
PREINFPLIREIADKVGATFLVDMAHFAGLVAAGVHPSPIPHADIVTTTTTKTLRGARGG
LVMTNREDLFKKLQSAVFPGVQGSAHLATISGKAVCLGEALTDEFKTYGANVKANASLLA
QVLQKRGVRIVSGGTDTHLVLVDVSSKGLTGQQSQDALSEINITSNKNPIPFDSTKPSEW
KGLRLGSSAGTTRGFGAKEFEIIGNLIADIFDAQTADESTRAAVIEKSRAVVAKLVGEFP
IYA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacccactcctatttcaacgacaaccttgctgaacgcgaccctctggtcttcaaagct
cttcaaggagaaaaaaagcgtcaacagggccagattgaactcattgcttcagagaactca
gtcagcctggcatgcttggaagccttaggctcagtgatcactaacaagtctgtagagggt
tatcctggtaagcgttttcacggcggcgctgacttcgctgacgttgtagaacaggctgca
atcgatcgcgccaaggatcttttcggctgcaatttcgtcaacgcgcagcctcactccggc
acccaggccaaccaagcagtattcttcgcgctgctccagcctggcgataccgtgttgagc
atggatctcgcctcaggcggccacttaagtcatggcgctaaaccaaaccagtcgggtcgc
tggttcaatatcgtctcgtacggggtagagcgcgaaacgggtttaatcgactatgccaac
ttggaggcgctggcttcggaacacaaacccaagctcatcatcgcgggtggctcctcatac
cctcgcgagatcaatttccctcttatccgtgagatcgctgacaaggttggcgcgaccttc
ctagtggatatggctcactttgcgggcctagtcgctgctggagtccacccatctcccatc
cctcacgcagatatcgtcacaactaccaccaccaaaaccctacgtggcgctcgcggcggc
ttggtaatgactaatcgtgaagacctctttaagaagcttcaatcggcggtattcccaggc
gtgcagggtagtgcacatttggcaacaatctccggtaaagcggtatgtctcggtgaagct
ctgaccgatgagttcaaaacctatggcgccaacgtcaaagctaacgctagcctgcttgcg
caggttctgcagaaacgtggtgtgcgcatcgtcagcggtggcactgatactcatcttgtt
ctggtagacgtctcctccaaaggtctgaccggtcagcagtcgcaagatgcactctccgag
atcaacatcacctcgaacaagaacccgattccgttcgacagcaccaagccatcggaatgg
aagggtttgcgtcttggctcctcggccggtaccactcgcggcttcggtgcgaaagagttt
gagatcattggcaacctgatcgcagatatcttcgacgctcaaactgctgacgagtcgacc
cgtgctgcagtcatcgagaagagccgtgcagtggttgcgaaactggttggtgaattccca
atctatgcctaa
DBGET
integrated database retrieval system