Pseudomonas taiwanensis: ICN73_22935
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Entry
ICN73_22935 CDS
T09297
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptai
Pseudomonas taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptai03032
]
ICN73_22935
03400 DNA repair and recombination proteins [BR:
ptai03400
]
ICN73_22935
Enzymes [BR:
ptai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ICN73_22935
DNA replication proteins [BR:
ptai03032
]
Prokaryotic type
DNA Topoisomerases
ICN73_22935
DNA repair and recombination proteins [BR:
ptai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ICN73_22935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
QOJ90697
UniProt:
A0A7L9GEH6
LinkDB
All DBs
Position
5114908..5115930
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPRTLHYVDDSQPGLTRRRWRDRFIYLDADGQRVRDSETLARIAALVIPPAYTDV
WICADPQGHLQATGRDARGRKQYRYHAQWRELRDQHKYGRMLAFAQALPKLRTQLEAHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNRSYGLTTLRNRHVQIKGSSIRFQFRGK
RGVEHNVTLNDRRLANLLKRCMELPGQALFQYLDEDGQRHSVGSTEVNQFLQQLTGADFT
AKDYRTWAGSSLALNLLKPLAWEPESEAKRQVAAIVRQVATRLGNTPAVCRRCYIHPAVL
EHYTLGRLANLPKNRVRKGLDPEEVALLLFLQALEEQEAH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgccccctgccgcgcaccctgcactacgttgacgacagtcagccgggcctg
acccgtcggcgctggcgcgaccgtttcatctacctcgatgccgatggccaacgagtacgc
gacagcgaaaccctcgcacgcatcgccgcactggtgatccccccggcctacacggatgtg
tggatctgcgccgacccgcaaggccacctgcaagccaccggccgtgatgcccgtggccgc
aagcagtaccgctaccatgcgcagtggcgcgaactgcgcgaccagcacaaatacgggcgc
atgcttgcgttcgcccaagccctgccaaagctgcgcacacagctggaagcccacttggcg
cggccagggctggaccgggaaaaggtcatggcgctggtggtgagcctgctggaccacacc
ctgatccgcattggcaaccagcgctacctgcgcgataaccggtcgtacggattgaccacc
ctgcgcaatcgccatgtacagatcaaaggcagcagcattcgctttcaattccgcggcaag
cgcggcgtcgaacacaacgtcaccctcaacgaccggcgcttggccaacctgctcaaacgc
tgcatggaactgcctgggcaggcactgtttcagtacctggatgaagacggccagcgccat
agtgtcggctccaccgaggtcaatcagtttttgcagcagttgaccggcgccgacttcact
gccaaggactatcgcacctgggccggcagcagcctggcattgaacctgctgaagcccttg
gcctgggagccggagagtgaagccaaacgtcaggtcgccgcaatagtccgccaggtggcc
acgcgcctgggcaatacgccggccgtgtgccgacgctgctatatccacccggcagtcctg
gagcactataccttggggcgccttgccaatttaccgaaaaaccgagtgcgcaaaggcctg
gacccggaggaagtggccttgctgttgtttcttcaggcactcgaggaacaggaggcccat
tga
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