Parvicella tangerina: CRYO30217_00033
Help
Entry
CRYO30217_00033 CDS
T08372
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ptan
Parvicella tangerina
Pathway
ptan02020
Two-component system
ptan02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CRYO30217_00033 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CRYO30217_00033 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptan03021
]
CRYO30217_00033 (rpoN)
Transcription machinery [BR:
ptan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CRYO30217_00033 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
Motif
Other DBs
NCBI-ProteinID:
CAG5076278
UniProt:
A0A916NP89
LinkDB
All DBs
Position
1:complement(33815..35260)
Genome browser
AA seq
481 aa
AA seq
DB search
MALRQSLQHKLLQKLSPQQIQLMKLLQVPTVELEQRIKQEIEDNPALEEGAEEIDRDLDR
EEEDWENDVDDSREDFDVSDYLDDDTPDYKLSVRNHGADNDEKAIPLSGGQSFQDLLISQ
IGLRVRDEKMREIAKTIIGNLDESGYLRREIENMIDDLAFSQNIMVTEEELLEGLEIVQD
LEPAGVGARDLKECLLLQLERKAPTVTIRTAQAILEKCFDEFTKKHYKKILKKLEIEEDD
LRTAINEIVKLNPKPGGAALQSNKTMQQIIPDFIIREEDGQLELTLNARNAPRLKVSKEY
AEMLRAYGDSKKTKSDKDAVMFVKQKIDAAKWFIDAIRQRQHTLLITMDAIMNYQKEFFL
TGDETNIRPMILKDIADIVEMDISTVSRVANSKYVETPYGIFLLKYFFSESLSTESGEEV
STREVKKILQEAVDNEDKKKPLTDEKLMNHLKDKGYNIARRTVAKYREQLGIPVARLRKE
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcattaagacagtcattacaacataagttactgcagaaactatctcctcagcaaatc
cagctgatgaagttattgcaggtgcctactgtggagttggaacaacggatcaaacaagaa
attgaagataaccctgctctggaggagggtgcagaagaaatagaccgtgatctggatcgg
gaagaagaggattgggaaaacgatgttgatgactctcgcgaggattttgatgtgagtgac
tacctggatgatgacactccagactataaactctccgttagaaatcatggagctgataac
gatgaaaaagctataccattatcaggagggcagtcttttcaagatttattgatctcacaa
attggactacgcgttcgtgacgaaaagatgagagagatcgccaaaacgattatcggcaat
ctggatgaaagtggttatttgagaagagaaatcgaaaacatgatcgatgacctagccttt
tctcaaaacatcatggttactgaggaggagttattggaaggtcttgaaatcgtgcaggat
ttggaacctgcaggtgtaggcgcaagagacctgaaggagtgcttgttgcttcaattagaa
cgaaaagctccaacggtcacgatcagaacagctcaggcaattttagaaaaatgctttgat
gagttcaccaagaaacactacaagaaaatccttaaaaaactggaaattgaggaagatgac
cttcgaacagccatcaatgaaattgttaagttaaatcctaagcctggaggtgctgcgctg
cagtctaacaagacaatgcagcaaattattcctgactttatcatccgagaagaagatgga
caacttgagcttacgttaaatgctagaaacgcacctcgcttaaaggttagtaaggagtat
gccgagatgcttcgagcgtatggagatagcaaaaagactaaatcagataaggatgcagtg
atgttcgttaaacaaaagatcgatgcagctaaatggtttatcgatgccatcaggcaaaga
caacatacgcttctgattactatggatgcgattatgaattaccaaaaagaatttttcctt
actggtgatgaaaccaatattagaccaatgattcttaaggacatcgcagatattgttgaa
atggatattagtaccgtttctcgtgtcgctaactccaaatatgttgaaacaccttatggt
atcttcttactgaagtatttcttcagcgaatctttaagcaccgaaagcggagaggaggtt
tctaccagagaggtgaaaaaaatcctacaagaagccgttgataatgaagacaagaagaag
cctctaacagatgaaaagttaatgaatcatctaaaagataaaggttataatattgcgcgt
agaacggtggcaaagtatcgtgaacaattggggattcctgtagctaggttgcgaaaagag
atttaa
DBGET
integrated database retrieval system
