Parvicella tangerina: CRYO30217_00824
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Entry
CRYO30217_00824 CDS
T08372
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRYO30217_00824 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptan03021
]
CRYO30217_00824 (rpoA)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_00824 (rpoA)
Enzymes [BR:
ptan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRYO30217_00824 (rpoA)
Transcription machinery [BR:
ptan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRYO30217_00824 (rpoA)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRYO30217_00824 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Cohesin_HEAT
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
CAG5078980
UniProt:
A0A916NFZ4
LinkDB
All DBs
Position
1:complement(953852..954844)
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AA seq
330 aa
AA seq
DB search
MAILDFQRPDKVIMLESDDFNGQFEFRPLEPGYGITIGNALRRILLNSLEGFAISSVRIE
GVDHEFASIKGVVEDVTEIILNLKQVRFKRQIDDVDNEKLTVKVSGQETFTAGDIGKFTS
GFQVLNPDHVICTMEKGVTLTIDLTIVKGRGYVPAEEHKTTTAPVGTIFVDSIFTPIKNV
KYSIENYRVEQKTDYEKLIIDIHTDGSIHSKDALKEAAKILIHHFMLFSDEKITLDTQER
AETEEFDETSLHMRQLLKSRLVDLDLSVRALNCLKAADVETLGELVSFAKSDLLKFRNFG
KKSLTELEDLIESKGLSFGMDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctatattagatttccaaagaccagataaagtaatcatgttagaatcagatgatttc
aacggtcaatttgaatttagacctttggagcctggttacgggattacaattggaaatgca
ttaagaagaattcttcttaactctcttgaagggtttgcaatctcttctgttagaatcgaa
ggtgttgatcacgaatttgcttcgatcaaaggagtggtagaagatgttactgagatcatc
cttaacttgaaacaagttagattcaagagacagatcgatgatgttgacaatgaaaaactt
accgttaaggtttctggtcaagaaacgtttactgctggagatatagggaagttcacttca
gggtttcaggtattaaatcctgatcacgtgatctgtaccatggaaaaaggagttactttg
acgatcgacctaactatcgttaaaggaagaggttatgttcctgctgaggagcacaagaca
acaacagctcctgttggaacgatcttcgttgattctatctttactccgattaagaacgtt
aagtattctatcgagaactaccgtgtagaacaaaagacagattacgaaaaattgatcatt
gacattcacacagatggttcgatccactctaaagatgcattgaaagaagctgcaaaaatc
ttgattcaccatttcatgttgttctctgatgagaagatcacgttggatactcaagaaaga
gcagaaactgaagagtttgacgaaacttcacttcacatgagacaattgttgaagtctaga
ttggttgatcttgatctttcagtaagagcattgaactgcttgaaagcggcagatgttgag
acattaggagaacttgtttctttcgctaagtctgacctacttaaattcagaaacttcggt
aagaagtcgttaactgaattagaagacttgattgagtctaaggggctttcttttggaatg
gacatctctaagtacaaattggataaagaataa
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