Parvicella tangerina: CRYO30217_01307
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Entry
CRYO30217_01307 CDS
T08372
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03030
DNA replication
ptan03430
Mismatch repair
ptan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRYO30217_01307 (dnaE)
03430 Mismatch repair
CRYO30217_01307 (dnaE)
03440 Homologous recombination
CRYO30217_01307 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptan03032
]
CRYO30217_01307 (dnaE)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_01307 (dnaE)
Enzymes [BR:
ptan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRYO30217_01307 (dnaE)
DNA replication proteins [BR:
ptan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRYO30217_01307 (dnaE)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRYO30217_01307 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
tRNA_anti_2
Intimin_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CAG5080428
UniProt:
A0A916NGV4
LinkDB
All DBs
Position
1:1489186..1493754
Genome browser
AA seq
1522 aa
AA seq
DB search
MYLIFDTETTGLPRDFNAPITDTDNWPRCVQIAWQLHDEMGNLIEQKDFLIKPDGYDIPF
QSEQIHGISTKLAETKGVDAKEVWKQFAEVLSRSKFVVGQNIMFDVNVMGCELYRYGVDS
SLTDLPILDTCTETTAELCQIPGGRGGKFKLPTLTELHEHLFGVPFAEAHNATADVEATT
RCFLELIRKRSFKAEELQQDEQYFDRFLVEHPDPIGTWDIKHLNLKAESAALKEDDGDAS
ISRKDKKENQERLEEVRFSHLHNHTQFSILQSTTTVGDLVTAAAKIGSPAVAITDTDNMM
AAFQFVNAGERHNNGIKAQIKAKQELLNAGTRIEKNEETGEEKEVPLVEEEVGALEAEIK
SLEKQFVKTIVGCELWVCKDRHNKSVKDNGHLVVFLAKNKNGYHNLSKLASAGHIEGKYY
VPRIDKQIIPELKEDVIATTGGLSGEIPQLILNVGEQQAEEAFVWWYEQFGDDFYVELNR
HGLEEEEVVNEVLLRFAKKYGVKYFAANNNFYIDKSDADAHDILLCIKDGEQKSTPIGRG
RGFRFGFPNDDFYFKSQEDMKEAFLDLPEAIECTEEIVAKIEPFTLGRDVLLPAFDIPEE
FQDDRDKEDPSLKIGENNYLRHLTYEGAKERYGEITPEIRERLDFELETIRNTGYPGYFL
IVQDFIAAAREMGVSVGPGRGSAAGSAVAYCTKITNIDPIKYDLLFERFLNPERISMPDI
DIDFDDEGRGRVIDYVIDKYGANQVAQIITYGTMAAKSSIRDAGRVLELPLPETDRIAKL
VPDMKLNKLFGMSEEQLAEKLNSDQMKMALELRDLLEKNGIDGEVVRQAKTIEGSMRTTG
IHACGVIITPSDIREHVPVALAKDSDMWSTQFDNSVVEDAGLLKMDFLGLKTLTLIKDTL
KIVKARHGIDIDIEKIPLDDTATYELFQRGETVGVFQYESTGMQKYLKDLKPNEFSDLIA
MNALYRPGPLEYIPTFVKRKHGIEEVEYDLPAMEEFLKETYGITVYQEQVMLLSQKLAGF
TKGEADTLRKAMGKKKKDVLDKMKPKFLEQGGANGHDTKILEKVWKDWEAFASYAFNKSH
STCYAWIAYQTAYLKAHYPAEYMAAVLSNNMNDIKTVTFFMEECRRMGLKVLGPDVNESY
YKFAVNDQGEVRFGMGGIKGVGQGPVRAIIDERKENGPFTSFFDMVRRVSLKDCNKRVME
NLAYAGAFDGFGDLHRAQYFGEDEKGRTLIENSLRYGTAFQTGQDSNQVSLFDMAGGEEI
EMPAPSIPNVDKWSVFQELSAEKEVVGIYISGHPMDDYSLETKYFCDIQLNDLNVHMNNL
PDKEFAVAGIISNFAHLESRKGNKYGFFELQDKSGGMEFRLFGETYLKLQHYLTQGNFLH
VKGVVKLKGKKFNPDGKQKEFSIQQIELLTNIRDRMLSKVYLRFDANQINRDSLAELEEI
LNKYEGTKTVYLDLIDYDEVSGVTLLSRNRKVNVSNEFLKEVKEVIGYEGFSVNKSELNR
RLHRLKMEQERMKEQNEELVED
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaattttcgataccgaaacgactggactacctagagattttaacgctccaatt
accgatacggataactggccaaggtgtgtacagattgcctggcagttgcacgatgaaatg
ggaaatctgatagaacagaaagactttttgatcaaaccggatggctacgatattccattt
caatctgaacagattcacggtatttcaacaaaacttgcggaaacaaaaggtgtagacgcg
aaagaggtttggaaacaatttgcagaggtattaagtaggtcgaagttcgtagttggacaa
aacatcatgttcgatgtgaatgtgatgggatgtgagttgtatcgttatggcgtagattcc
tcgttgacggatttaccgatattagatacctgtacagaaactacggcagaattgtgtcaa
atacctggaggtaggggaggaaagtttaaactgccaacattaacagagcttcacgaacat
ttgtttggagtaccttttgcagaagcgcacaatgcaacggccgatgtggaagctacaacc
agatgtttcctggagttaattcgtaagcgttcttttaaggcggaagaactgcaacaagac
gagcagtattttgatcgatttttagttgaacatccagacccaattggaacatgggacatc
aagcaccttaacttaaaagcagaatcggctgctttaaaagaggacgatggagatgccagt
atttccagaaaagataaaaaggagaatcaggaacgtctcgaagaagtaaggttctctcac
ctgcataatcatacacaattctctattcttcaatcaacaacaacagttggggacttggta
actgcagctgcaaagattggaagtccggcagtagcaatcacagataccgacaacatgatg
gctgcgttccagttcgtaaatgctggtgaacgtcacaataatggtatcaaagcacagatc
aaggcaaagcaagaattgttaaatgctggtacgcgaattgaaaaaaacgaagaaactggt
gaagaaaaagaggtcccgcttgttgaagaggaagtcggagcgttagaggctgagatcaaa
tctcttgaaaagcaatttgtaaaaacaatagtaggttgtgaactttgggtttgtaaagat
cgtcacaacaaatcagtgaaggacaatggtcacctggttgtgttcttagcaaaaaataag
aatggttaccacaatttgtcaaaactggcctctgctggacatattgaaggaaaatactac
gttccgagaattgataagcaaattattcctgagcttaaagaagatgtcatcgctactaca
ggaggattgtctggtgaaattccacagttgatcttaaacgttggagagcagcaggcagaa
gaagcttttgtgtggtggtatgaacagtttggtgatgatttctacgtagaattgaatcgc
catgggttggaggaggaagaagtagtaaacgaagtgttattgcgtttcgctaagaaatat
ggcgtgaaatactttgcggcaaacaataacttctacattgataaatcagatgcagatgct
catgatatcttactgtgcataaaagacggagaacaaaagtcaacgccaataggtcgaggt
agaggctttagattcggatttccaaatgatgacttttatttcaagtctcaagaagacatg
aaagaagcctttttagatttacctgaggccattgagtgcactgaggagattgtcgctaaa
attgaaccgtttacccttggaagagatgtcttgcttccagcttttgatattccagaagag
tttcaagacgatagggataaggaggatccaagcctgaaaataggggagaataattacctc
agacatttaacctacgaaggagcaaaagagaggtatggcgaaattacgcctgagatcagg
gaacgtttagattttgaactggaaaccattagaaatacaggatatcctggttacttcctg
attgtgcaagatttcattgcagctgcccgtgaaatgggagtttctgtaggtccgggtagg
ggatctgccgcggggtcggcagttgcgtattgtacgaaaatcaccaacattgacccgatt
aagtacgacctgctttttgagcgtttcctgaatcctgagcgtatatcgatgcccgatatt
gatatagactttgatgatgaagggcgtggaagggtaattgattatgtgatcgataaatac
ggagcgaatcaggtggcacaaatcatcacctatggtaccatggcggcaaaatcgtctatt
cgtgatgcggggcgcgtgctggagttaccattacctgaaaccgatcgtattgcgaaactt
gttcctgatatgaagttgaacaaactctttggaatgtcagaagaacagttggcagagaag
ttaaacagtgaccaaatgaaaatggcactggaacttcgtgacctgttagaaaaaaatgga
atagacggagaggtagttcgccaagccaagaccattgaaggttccatgagaactactgga
attcatgcgtgtggggttattattaccccaagcgatattcgagagcacgttcctgttgct
ttggcaaaggattcagacatgtggagcacacagtttgataactccgtagttgaggatgct
ggactgctcaagatggatttcttggggttgaaaacattgacccttattaaggatacgcta
aagatcgtcaaagcccgccatggaattgatatagatattgagaagatccctttggatgac
acagctacgtacgaactgttccaacgaggagaaaccgtaggagtgttccagtacgaatcc
acagggatgcagaaatacttgaaggatttaaaacccaatgagttttctgatctgattgct
atgaatgccttgtatcgtcctggtccgctggaatacattcccacctttgttaagcgaaag
cacggaatagaggaagtggagtatgaccttcctgcgatggaggagttcttaaaagagacc
tacggaattacggtttatcaggagcaggtaatgttgctttcacagaaattagctggattt
acgaaaggtgaggcagataccctccgaaaagcgatgggtaagaaaaagaaggatgtactt
gataagatgaaacccaagtttcttgagcaaggcggagctaacgggcacgatactaagatt
ctcgagaaagtatggaaagactgggaagcgtttgcttcttatgcttttaataaatcacat
tctacctgttatgcttggatagcctatcaaacggcttacttgaaagctcactatcctgcc
gaatatatggcagcggtgttgagtaataacatgaatgacatcaaaacggtgacgttcttc
atggaggagtgtcgcagaatgggcttgaaagttcttggtcctgatgtgaatgaatcttat
tataagtttgccgtgaatgatcagggtgaggtgcgttttggtatgggaggaatcaaaggt
gttggtcaaggtcccgtccgagccattattgatgaacgaaaggaaaatggaccatttacg
tccttcttcgacatggttagaagagtttctctaaaagactgtaataaaagagttatggag
aacttggcctatgcaggtgcatttgatggcttcggtgatttgcaccgagcgcaatacttt
ggagaggatgaaaaaggaagaactttaattgagaattcgttgaggtatggaactgctttt
caaaccggacaagactctaatcaagtaagtctgtttgatatggctggaggagaggagatt
gaaatgccagccccaagtattccaaatgtagataaatggagtgtttttcaggaattgagt
gcagaaaaagaagtggtgggaatctatatctctggtcatcccatggacgattatagtctg
gaaacaaaatacttctgcgatatccagttgaatgacttgaatgtacacatgaataacctg
ccagataaagaatttgctgttgcaggtatcatatcaaactttgctcaccttgagagtaga
aaagggaacaaatatggtttcttcgaattgcaggataagtcagggggtatggagtttaga
ctatttggagaaacctacttaaagttgcaacattacctaacacaaggaaactttctacat
gtgaaaggagtggtaaaactgaaaggaaaaaaattcaatccagacggaaagcaaaaagag
tttagtattcagcagatcgaattgctgaccaatattcgtgatcgtatgctaagcaaagtc
taccttcgatttgatgcgaatcagatcaacagagacagtttggcggaacttgaagaaatc
cttaataagtatgaaggcaccaaaactgtttacctggatttgatagattatgacgaagta
agtggtgttaccttgttatccagaaaccgaaaagtaaatgtctccaacgagtttttgaaa
gaagtaaaagaggtaattggctatgaaggtttttctgtgaataaatcagaattgaacaga
cgtctgcatcgtttgaaaatggaacaggagaggatgaaagaacagaatgaagaattagta
gaagattag
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integrated database retrieval system
