Parvicella tangerina: CRYO30217_02377
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Entry
CRYO30217_02377 CDS
T08372
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ptan
Parvicella tangerina
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptan03032
]
CRYO30217_02377 (hup)
03036 Chromosome and associated proteins [BR:
ptan03036
]
CRYO30217_02377 (hup)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_02377 (hup)
DNA replication proteins [BR:
ptan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CRYO30217_02377 (hup)
Chromosome and associated proteins [BR:
ptan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CRYO30217_02377 (hup)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CRYO30217_02377 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
YflT
Motif
Other DBs
NCBI-ProteinID:
CAG5084110
UniProt:
A0A916JP27
LinkDB
All DBs
Position
1:2639191..2639481
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AA seq
96 aa
AA seq
DB search
MTKAEIVSEISDKTGIEKVAVMATVEAFMDSIINAMENGNNVYLRGFGSFVIKERAQKTG
RNISKNTTIIIPAHNIPAFKPSKSFVESIKTKVKVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagagattgtaagtgaaatttcggataaaactggaattgaaaaagtggcg
gtgatggctactgttgaggcgttcatggactctatcatcaacgcaatggaaaatggaaat
aacgtataccttagaggctttggttctttcgtaattaaggaaagagcacaaaagacaggt
agaaatatttcgaagaacactactataattatccctgcacataatattcctgctttcaaa
ccttcaaaatcatttgttgaaagcattaaaacgaaagtaaaggtgaaataa
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