Parvicella tangerina: CRYO30217_02572
Help
Entry
CRYO30217_02572 CDS
T08372
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
ptan
Parvicella tangerina
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptan03032
]
CRYO30217_02572 (hupB)
03036 Chromosome and associated proteins [BR:
ptan03036
]
CRYO30217_02572 (hupB)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_02572 (hupB)
DNA replication proteins [BR:
ptan03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CRYO30217_02572 (hupB)
Chromosome and associated proteins [BR:
ptan03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CRYO30217_02572 (hupB)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CRYO30217_02572 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
UBA_HYPK
DNA_ligase_OB_2
DUF6927
Motif
Other DBs
NCBI-ProteinID:
CAG5084809
UniProt:
A0A916JP25
LinkDB
All DBs
Position
1:2873069..2873341
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELVDAIAAESGLTKADSERALKGFMGAVQGALKKGDRVSLVGFGSFSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGSELADKVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaattagtagatgctatcgctgctgagtcaggattgactaaagcagat
tcagaaagagctttaaaaggattcatgggagctgtacaaggtgctcttaagaaaggagac
agagtttctctagtaggattcggatctttctcagtttctaaaagagctgcaagagaagga
agaaaccctcaaactggaaaaactatcaaaatcgctgctaaaaatgtagtgaaatttaaa
gctggttctgaattagctgacaaagtaaactaa
DBGET
integrated database retrieval system
