Parvicella tangerina: CRYO30217_02712
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Entry
CRYO30217_02712 CDS
T08372
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ptan
Parvicella tangerina
Pathway
ptan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRYO30217_02712 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptan03019
]
CRYO30217_02712 (rny)
Messenger RNA biogenesis [BR:
ptan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CRYO30217_02712 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Nsp1_C
Motif
Other DBs
NCBI-ProteinID:
CAG5085286
UniProt:
A0A916JNU4
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All DBs
Position
1:3027743..3029275
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AA seq
510 aa
AA seq
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MEIAIGIVIGVLVGAGIGFVIFNNILKSKRTAILKEAEVEGETIKKDKILQAKEKFLSLK
EEHEKNVNQRNQKLAERENKIKQKEKTLSQKIEETNRKDKEFKKAQSKLDKRLEVVTTKQ
DELEKLHAKQVKELEKLSGYSAEEAKAQLVEALKDEARTDAMAYIKEIQDEAKLNANRDA
KKIVIQSIQRVAAEEAIQNSVSVFNIESDEMKGRIIGREGRNIRAIEAATGVEVIVDDTP
EAIILSCFDPVRREIARLSLHQLVSDGRIHPARIEEVVAKTKKSLTEEIIETGKRTCIDL
GIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVANLCATMASELGLNPKVAKRAGLLHDI
GKVPEDEPELPHAILGMKLAEKFGEKPDVCNAIGAHHDEIEMNTLVAPIVQVCDAISGAR
PGARREIVESYIQRIKDLENMALAYDGVNTAYAIQAGRELRVLVEADKISDKRSEELSFE
ISHKIQTEMTYPGQVKVTVIREKRSVAYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagctattggaattgtgattggggtgcttgttggagctgggattggctttgta
atctttaacaacatccttaaatctaaacgtactgcaattctcaaggaggccgaagtggag
ggagaaaccatcaaaaaagacaagatccttcaggcaaaagaaaagtttctctccttaaaa
gaagagcatgaaaaaaatgtgaatcagcgaaatcagaagttagctgaacgggaaaacaag
attaaacagaaagaaaagacgctttctcaaaagatcgaagaaacgaaccgcaaagataaa
gagttcaaaaaagctcaaagcaaactagacaagcgtcttgaggtcgtgacgaccaaacaa
gatgagttggaaaagcttcatgcaaaacaagtcaaagaactggaaaagctatcaggatat
tcggctgaagaagccaaagcgcaactggtggaagccttaaaagacgaagcaaggacagat
gctatggcttacatcaaagagattcaagatgaggctaaactaaatgcgaaccgtgatgca
aagaaaattgttattcaaagtatccagcgcgttgcagctgaagaagcaattcaaaattct
gtttctgtatttaatatcgaaagtgatgagatgaaaggtagaatcattggtcgagaagga
cgaaacatccgtgctattgaagctgcgactggtgtagaagtaatagtagatgacacacca
gaagcgatcattctttcgtgttttgatcccgtgagacgggagattgcaagactttcactt
catcaattggtgagcgatggtagaattcaccctgcgagaattgaggaggtagttgctaaa
acaaagaaatccttaacggaagagattattgaaacgggtaagagaacgtgtatcgactta
ggaattcacggcctacatccagagctgatcaaaatggtgggtcgtatgaagtaccgttct
tcttatggtcagaacttactgcaacactccagagaagtagccaatttatgtgctactatg
gcatctgaacttggactaaatcctaaagttgccaaaagagctggcttattgcacgacatt
ggaaaagttccagaagacgaaccagaattgccacacgctatactgggtatgaaattggct
gagaaatttggagagaagccagatgtgtgcaatgccattggtgctcaccacgatgaaatc
gaaatgaacaccttggttgctccaatcgttcaggtatgtgatgccatctctggtgctaga
ccaggtgctcgtagagagattgtagagtcttacattcagcgaattaaagatcttgagaac
atggcgcttgcatacgatggtgtaaataccgcatacgcgattcaggcaggtcgtgagttg
cgtgtactagttgaagcggataagatcagtgacaagcgttctgaagaactatcttttgag
atctctcacaaaattcaaacagaaatgacttatccaggtcaggtaaaagtaactgtgata
agagagaagaggtcggttgcttacgcgaagtaa
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