Parvicella tangerina: CRYO30217_02813
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Entry
CRYO30217_02813 CDS
T08372
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptan
Parvicella tangerina
Pathway
ptan03410
Base excision repair
ptan03430
Mismatch repair
ptan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CRYO30217_02813 (recJ)
03430 Mismatch repair
CRYO30217_02813 (recJ)
03440 Homologous recombination
CRYO30217_02813 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_02813 (recJ)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CRYO30217_02813 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CRYO30217_02813 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRYO30217_02813 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAG5085611
UniProt:
A0A916JPE4
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Position
1:complement(3132173..3133984)
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AA seq
603 aa
AA seq
DB search
MFSVINFLRICYPNELITFKIYTMNNYQWCLDHDTDIETTVELSKVLGVPELVAKLLVQR
GITHFEDARAFFRPSLDDLHDPFLMEDMQLAVDRLARALSDGEKIMVYGDYDVDGSTSVA
LMYSFIRDFGHDVIYYQPDRYAEGYGISMQGIETAKEEGVKLLIALDCGTRAIQQVKKAK
EYGIDVVICDHHTPGQDLPEAYAILNPKKSTCAYPYKELCGCGIGYKFIQAFSLHQGHGT
EYTKDYLDFVTVAIGADIVPITGENRTLAFFGLKLVNENPRLGVKTLLDAGSKLSNISIS
DLVFTVAPRVNAAGRISHASAAVEMLLVDDEEQANEWGEIINGHNLERKELDQRITHEAL
QLMENDDFYLKSSSTVVWKEGWHKGVVGIVASRLIEHHYKPTIVLAVKDNEATGSARSVK
GYDVLEAIEKCADLLTKYGGHKYAAGLSLPIEHLEQFRERFEEVVANSLPEDLKVPKLQI
NAEIKSEDLIPETAGNPFPKLFRLIEQFAPFGPRNMRPVFLIRNLKDSGYSRVVGEDHLK
VTLKCERTEQIFTGIAFGRADKLEMLQRHNVDVVFSLSLNEYRGSQELQLDIKDLRPSGE
FVE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgttcagcgtcatcaacttccttagaatttgttaccccaacgaattaattacgttcaaa
atctataccatgaataattatcaatggtgtcttgatcatgacacggacatagagaccact
gtcgaattgtcaaaagtgttgggagttcctgaattggttgccaagttgttggtgcagaga
ggaataacgcattttgaagatgccagagctttttttagaccatcgttagacgatttgcat
gatccatttctcatggaagatatgcaattagcagttgaccgacttgcccgtgccttgtct
gatggtgagaaaataatggtttatggagactatgatgtggatggtagtacttcggtggca
ttgatgtattctttcatcagagattttgggcatgatgtgatctattatcagccagatcgt
tatgcagaggggtacggaatctcaatgcaaggaattgaaacggccaaagaagaaggcgta
aaattgcttatcgctttggattgtggcacaagagctattcagcaggtaaagaaagctaaa
gagtatggtattgatgtggtgatttgtgatcaccatacgccaggtcaagatctgcctgaa
gcttatgctatcttgaatccaaagaagtccacttgtgcctatccgtataaagaactttgc
ggatgtggaattggctataagtttatccaggctttcagcctccatcaaggtcacggaact
gagtatacaaaagactatctggattttgttactgttgcaattggagcagatattgttcct
attactggagaaaacagaacattggccttctttggcttgaaactcgtaaatgaaaatcct
cgtttgggagttaaaacgttgttggatgcaggaagtaaattatctaatatttctatttca
gatttggtttttaccgtagctcctcgagtaaatgccgcgggaagaattagtcatgcaagt
gctgcggttgaaatgttgctagtagatgatgaagaacaagctaacgagtggggtgaaatt
attaacggacacaacttggagcgaaaggaattagatcagcgaatcactcacgaagccctt
caactaatggaaaatgatgacttctatttgaaatcatcatcaactgtagtatggaaagaa
ggatggcacaaaggagtagtagggattgtggcttcacggctaatagagcatcactacaaa
ccaaccattgttttggcggttaaggacaacgaagcaactggttcagcaagatcggtaaaa
ggatatgatgtacttgaagcaatcgaaaaatgtgcggatctactcactaaatatgggggt
cataaatatgcggctggtttaagcctaccaattgaacatttagaacagtttcgtgagcga
tttgaagaagtggttgccaactcactaccggaagacttgaaggttcccaaactacagatc
aacgcagaaataaaaagtgaagatttaattccagaaacggctggaaacccttttccgaag
ttgtttagactcatagagcaatttgcacctttcggtccccggaatatgcgtccggttttt
ctaattcggaacttaaaagattctggttattcaagagttgttggagaagaccatctaaaa
gttacgcttaaatgtgaacgtactgagcagatctttacaggtattgcctttggtagggca
gacaaactagagatgttacaacgtcataatgttgatgttgtgttcagtctatcactcaat
gaatatcgaggaagtcaggaacttcaattggatattaaagatttaagaccttcaggcgaa
tttgtagaatag
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