Parvicella tangerina: CRYO30217_03120
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Entry
CRYO30217_03120 CDS
T08372
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRYO30217_03120 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptan03019
]
CRYO30217_03120 (groL)
03110 Chaperones and folding catalysts [BR:
ptan03110
]
CRYO30217_03120 (groL)
03029 Mitochondrial biogenesis [BR:
ptan03029
]
CRYO30217_03120 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptan04147
]
CRYO30217_03120 (groL)
Enzymes [BR:
ptan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CRYO30217_03120 (groL)
Messenger RNA biogenesis [BR:
ptan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CRYO30217_03120 (groL)
Chaperones and folding catalysts [BR:
ptan03110
]
Heat shock proteins
HSP60 / Chaperonin
CRYO30217_03120 (groL)
Mitochondrial biogenesis [BR:
ptan03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CRYO30217_03120 (groL)
Exosome [BR:
ptan04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CRYO30217_03120 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CRYO30217_03120 (groL)
Exosomal proteins of breast cancer cells
CRYO30217_03120 (groL)
Exosomal proteins of colorectal cancer cells
CRYO30217_03120 (groL)
Exosomal proteins of bladder cancer cells
CRYO30217_03120 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
CAG5086436
UniProt:
A0A916JPX0
LinkDB
All DBs
Position
1:complement(3474643..3476283)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKEIVFDIDARDRMKKGVDALANAVKATLGPKGRNVVIDKKFGAPHVTKDGVTVAKEIE
LKDAVENMGAQMVKEVAAKTADIAGDGTTTATVLAQAIISGGLKNVAAGANPMDIKRGID
KAVDAIVEELQKLSQEVGSDSEKIKQVASISANNDEAIGALIAEAMKVVGNDGVITVEEA
KGTETEVKTVEGMQFDRGYLSPYFVTDTEKMIAELDNPYILIHDKKISNLQELLPVLEPV
AQSGRPFLIIAEDVDSNALAALVVNRLKAGLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFKLENTTMDMLGTCEKVEIDKDNTTVINGSGNKEDITARTNQIKAQIESTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALAATRAAVEEGIIPGGGVAYI
RASEALDAITGENEDEKTGIAIIKRAVEEPLRQIIENAGGEGAVIVQKIKEGKDDYGYNA
RTEVFENLYAAGVIDPTKVSRIALQNASSVAAMMLTTECVIADEPEEEGAGMPMGGGMPG
GMPGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaatagtatttgatattgatgcaagagaccgaatgaaaaaaggagttgat
gctcttgccaatgcagtgaaggcaacacttggaccaaaaggtagaaatgttgtaatcgat
aagaaatttggagcacctcacgtaactaaagatggtgtaacggtagctaaggagatcgaa
ttgaaagacgctgttgagaacatgggagctcaaatggtaaaagaagttgcggctaaaaca
gcggatattgcgggtgatggtacaactactgctaccgttttagctcaggcaatcattagt
ggtggtttgaagaacgtggctgctggtgccaacccaatggatatcaaaagaggaatcgat
aaagcagttgatgcaattgttgaagaactgcaaaagctttctcaagaagtgggtagtgat
agtgagaagatcaaacaagtagcctcgatttctgctaataatgacgaggcgatcggtgcg
ttgattgcagaggcaatgaaagtagttggtaatgatggtgtgattacagtagaagaagca
aagggaacagaaacagaagtgaaaacagtggagggaatgcagtttgacagaggttatctt
tctccttacttcgtaacggatacggagaaaatgatcgctgaattggataacccgtatatt
ttgattcacgataagaagatttctaatttacaagagctacttccagttttagaacctgtt
gctcaatcaggaagaccatttttgatcattgctgaagatgtggatagtaatgcgttggct
gcattggttgtaaatagactgaaggctggattaaaagtggcagcggttaaagcgcctggc
tttggagatcgaagaaaagcaatgttagaagatattgcgatccttactggaggtaccgtt
atttctgaagaaagagggtttaaattggagaataccacaatggatatgttaggtacatgt
gaaaaagtggagatcgacaaggacaacactaccgtaatcaacggatctggaaacaaggag
gatatcacagctagaactaatcagatcaaagcgcagattgaatctaccacttctgattac
gatagagagaagcttcaagaaagattagcaaaacttgctggtggagtagcagtactatat
gttggtgcggcaagtgaagtggagatgaaagagaagaaagaccgagtggatgatgctttg
gctgctacaagagctgcagttgaagaaggaataatccctggaggtggtgttgcgtatatc
cgagcttctgaagctttagatgcgatcacaggtgagaatgaggatgaaaaaaccggaatt
gcgatcatcaaaagagcagttgaggagccacttagacaaatcatcgaaaatgctggtggt
gaaggtgccgtaattgtacagaagatcaaggaagggaaagatgactatggctacaatgca
agaactgaagtttttgagaacttgtatgcagctggagttatcgatccaaccaaggtttct
agaattgcacttcaaaatgcttcttcagtagcagcaatgatgttaactactgagtgtgta
attgctgatgaaccagaagaagaaggtgcaggaatgcctatgggtggcggaatgccaggt
ggaatgccaggtatgatgtaa
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