Parvicella tangerina: CRYO30217_03173
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Entry
CRYO30217_03173 CDS
T08372
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRYO30217_03173 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptan03019
]
CRYO30217_03173 (recQ_2)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_03173 (recQ_2)
Enzymes [BR:
ptan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRYO30217_03173 (recQ_2)
Messenger RNA biogenesis [BR:
ptan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRYO30217_03173 (recQ_2)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRYO30217_03173 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
CAG5086554
UniProt:
A0A916NJU5
LinkDB
All DBs
Position
1:complement(3533528..3535636)
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AA seq
702 aa
AA seq
DB search
MNKENLNHILKANFGFEHFRPNQEDIIRSAITGNDTLAIMPTGGGKSICFQLPALVFDKL
TIVISPLIALMKDQVDGLKANGIKADFINSTKSESDHQRLVHEITAGTLKLLYIAPESLT
YIDHLIQEQYISMIAIDEAHCISSWGHDFRPAYTQLGYLKQRLPNTPVLALTATADKATR
EDIVKQLNLKNPNRFVSSFNRPNLYSEVRPGQERIKQIKTFISRRKGESGIIYCLSRKST
ERLAEKLNDSGVNALAYHAGLPADVRENAQEAFINDEVEVMCATIAFGMGIDKSNVRWVI
HYNLPKNIEGYYQEIGRAGRDGLDSDTLLFYSFADVMQLRKFAENTSNESLQLAKLDRMQ
QFAESFNCRRKALLSYFGESLEEDCGNCDNCKSPPALFDGTVIAQKALSAIKRLREAETI
QNIVDFLRGSSNAYIFSRGYQHLKTYGVGKDVSWKDWTQYMVQLLNQGYCEIAFHDGNKI
KLTSLSEQVLFHGKKVTLAHNVDKTVSHQPKKKQKSEGKNGADLFQELRKLRMQIAQEEG
VPPYIVFNDASLKEMVKDKPTYDEAFLAVDGVGRAKLEKYGDQFMNAILNYEKEGKQKKA
NTYQETWELYKKGLSVQEIALSRKLNEATVFSHLSKLYSDGKPIQLEQYLESGVLDKVRK
AYSEIKDSKALKPYFEYFNEEVPYGQIRLALTILETPVNQHV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagagaacttaaaccatatcctgaaggctaacttcggtttcgagcacttccga
ccgaatcaggaggatatcattcgcagtgcaataacaggaaatgatacgttggcaataatg
ccaaccgggggtggtaaatccatctgttttcaattgccagcactcgtttttgacaagttg
accatcgttatttctccgcttattgcattgatgaaagatcaggtagatggtttgaaagcg
aatgggataaaagccgactttatcaatagcacgaaaagtgagagtgatcatcaacggctt
gtgcatgaaataacagcaggcacactcaaattgttgtatatagccccagaaagcttaact
tatatcgatcacttgattcaagaacagtacatttcaatgattgcaattgatgaagcgcac
tgtatttcatcctggggacatgactttaggcctgcctacacccaactggggtacttgaaa
caacgattgcccaatactcctgtgttagcacttacagctaccgctgataaagcaacgaga
gaggatatcgtaaaacaactcaatctaaaaaatccgaacagatttgtgtcatccttcaat
cgccccaatctttattcagaagtgcggcctggtcaggaacgtattaagcaaataaagacg
tttattagcaggcgtaagggagagtcaggaattatttattgtttaagtaggaagtcaacg
gagcgtttggctgagaaattgaatgattctggggtcaatgcgttggcctatcatgcagga
ttgcctgcagatgttagagaaaatgctcaagaggcatttatcaatgatgaggtggaagta
atgtgtgcgactatcgcttttggaatgggaattgataagtcaaatgtccgttgggtgatc
cattataaccttccaaaaaatatagaaggatattatcaggaaattggcagagctgggcgc
gatggactcgattcagacaccttgctgttctacagttttgctgatgttatgcaacttaga
aagtttgccgagaatacaagtaatgaatctcttcagttggctaagttagaccgaatgcag
cagtttgcggagtctttcaattgtagaagaaaggctttgctgagttattttggagaatct
ttggaagaagactgcggaaactgcgacaactgtaaaagtcctcctgctctctttgatgga
accgttatcgcacaaaaagctttgtcagcgataaagcgtttaagagaagcagaaaccatc
cagaatattgttgattttttgcgtggatccagtaatgcttatatcttctcgaggggatat
cagcacctcaaaacctatggagtaggtaaagacgtgtcctggaaagattggacgcagtat
atggttcaactattgaatcaagggtattgcgagattgcttttcatgatggtaacaagatt
aaacttacttcgctttcagaacaagtattgtttcatggaaaaaaagtcactttagcacac
aatgttgataagaccgtttctcatcaacctaaaaagaagcaaaaatctgaaggaaagaac
ggagctgacttgtttcaggaactcaggaagctgcggatgcaaatagctcaagaagaaggt
gtgccaccttacattgtgtttaatgatgcgtcccttaaagaaatggtgaaagataagcca
acttatgatgaagcgtttttggctgttgatggtgtgggaagagctaagctggagaagtat
ggagatcagttcatgaatgcaattctcaactatgagaaggaaggcaaacagaagaaagcg
aacacttaccaagaaacctgggaactctataaaaaaggtttgtctgttcaagagattgcc
ttgtcaagaaagttaaacgaagcgactgtcttctcccatctgagcaagttgtattcggat
ggaaaaccaatacaacttgagcagtatctggaaagtggtgtgctagataaagttagaaaa
gcatattcagagattaaggactcgaaagcactaaaaccatactttgagtatttcaacgaa
gaagttccctacggacagataagattagccttgaccatattagaaacaccagttaatcag
catgtgtag
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