Parvicella tangerina: CRYO30217_03347
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Entry
CRYO30217_03347 CDS
T08372
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ptan
Parvicella tangerina
Pathway
ptan03030
DNA replication
ptan03430
Mismatch repair
ptan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRYO30217_03347 (holB)
03430 Mismatch repair
CRYO30217_03347 (holB)
03440 Homologous recombination
CRYO30217_03347 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptan03032
]
CRYO30217_03347 (holB)
03400 DNA repair and recombination proteins [BR:
ptan03400
]
CRYO30217_03347 (holB)
Enzymes [BR:
ptan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRYO30217_03347 (holB)
DNA replication proteins [BR:
ptan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRYO30217_03347 (holB)
DNA repair and recombination proteins [BR:
ptan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRYO30217_03347 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
CH
bCoV_S1_N
Motif
Other DBs
NCBI-ProteinID:
CAG5086953
UniProt:
A0A916JQC2
LinkDB
All DBs
Position
1:3710149..3711273
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AA seq
374 aa
AA seq
DB search
MLFKDVIGREDLKEHLKHTVQNKRISHAQMFLGKEGSGGIPMALAYTRYILCENRSEQDA
CGSCRNCIRMDKLEHPDVHFSYPVQLVSKKVDCSDDVLTQWRELISENPYFSSSDWYDKQ
LGNKKQGTIGTKEAESIVKKLSLKSFEGNYKVLIMWLPELMNISASNKLLKIIEEPPANT
LFILVSENADRIISTILSRTQLVKVLPPKEDEIAQYLADHYELSFEEGKNFAHLAERNVA
EAIHLIKHSESSSFNIENFIQWMRICYKRDVAETINWVDQIAKAGREDQKSFLKYCLQMF
RNAIVGHYTGGETVTLTKEQEGFLKKFAPFINHNNIVPLTESIEEAHYHIERNANPKILF
MDVSLKIFLQLKKA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcaaagacgtcataggaagagaagaccttaaagagcacctgaagcatacggtt
cagaacaaaaggattagtcatgcccaaatgttcttgggtaaagaaggctccggaggaatt
cccatggcactagcctataccaggtatattctgtgtgaaaacaggtctgagcaagacgct
tgtggaagctgtagaaactgtattcgcatggataaattagagcatccggatgttcatttt
tcgtatcctgtgcaattggtttctaaaaaagtagattgtagtgatgatgtgctgactcaa
tggcgagagttgatttcagaaaatccttatttctcctcgagtgactggtacgacaaacaa
ctcggaaacaaaaaacaaggaactataggaacaaaggaggctgaaagtattgtcaaaaag
ctatccttaaaatcatttgaaggaaactataaagtgcttatcatgtggcttcctgaactc
atgaacatctctgcatctaataaattgttgaagatcattgaggaacctcccgcaaatacg
ctttttattctagtttccgaaaatgcggatcgtatcatttcgaccatcttatccagaaca
cagttggtaaaagtattgcctcccaaagaggatgaaatcgcccaatatctggccgatcat
tacgagctttcatttgaagaagggaaaaactttgcacatttggccgaacgtaacgttgct
gaagccatccatctgatcaagcactctgagtcatctagctttaatattgagaacttcatt
cagtggatgcgtatctgctacaagagagatgttgctgaaaccatcaactgggtagaccag
atcgctaaagcagggagagaagatcagaaatcctttttgaaatactgtttgcaaatgttt
agaaacgccatcgtaggtcattacacgggtggtgaaacagtgacactaacgaaagaacaa
gaaggcttcttaaaaaaattcgctccgtttatcaatcacaataacattgtacccttgaca
gagtcgattgaagaagcgcactaccacattgagcggaatgccaacccaaagattctcttc
atggatgtttctttaaagattttcttacagctcaagaaagcataa
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