Parvicella tangerina: CRYO30217_03501
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Entry
CRYO30217_03501 CDS
T08372
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
ptan
Parvicella tangerina
Pathway
ptan00061
Fatty acid biosynthesis
ptan00540
Lipopolysaccharide biosynthesis
ptan01100
Metabolic pathways
ptan01212
Fatty acid metabolism
Module
ptan_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
ptan00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CRYO30217_03501 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CRYO30217_03501 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptan01005
]
CRYO30217_03501 (lpxC)
01004 Lipid biosynthesis proteins [BR:
ptan01004
]
CRYO30217_03501 (lpxC)
Enzymes [BR:
ptan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CRYO30217_03501 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
CRYO30217_03501 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
ptan01005
]
Lipid A
CRYO30217_03501 (lpxC)
Lipid biosynthesis proteins [BR:
ptan01004
]
Fatty acid synthase
Component type
CRYO30217_03501 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
Motif
Other DBs
NCBI-ProteinID:
CAG5087511
UniProt:
A0A916JQC0
LinkDB
All DBs
Position
1:complement(3867945..3869342)
Genome browser
AA seq
465 aa
AA seq
DB search
MNLKQHTLKGSISFEGHGLHTGKKVKMTVEPADANFGYKFQRVDLDDQPIIPADADLVTD
TQRGTTLEKKGVKVCTTEHILAALYGMQVDNALIKIDNEEIPIMDGSAAQFVEQIEKIGL
EEQDADREFFEFDENQPFECLEKGVEMLAIPYEDFRITVMVDYNSEVLGTQHASMYEIGE
FQKEISPCRTFVFLKELEFLAKQGLIKGGEVDNAIVLVERENVPQEEIDALAKLLGKEDE
TYKVKGRTLNNIKLKFINEPARHKLLDIIGDLALVGKPIKGHILAARPGHSGNTSFAKII
KNLMKEQAKKGKKFDLDKEPLYNINDIERMLPHRYPFLLVDKIMEITDDGIVGVKNITMN
EPQFTGHFPGNPVMPGVLQIEAMAQVGGIFALSKVEDPEYYSTYFMKIDNVKFKQKVIPG
DTVVFDLKLLSPMRRGLVNMGGTAYVNGKPVMQAEMLAQVIKDKA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaaacaacataccctgaagggtagtatctcctttgaaggccatgggctgcac
acgggtaagaaggttaagatgaccgtggagcctgcagatgcaaatttcggatataaattt
caaagagttgacttggatgatcagccaattattccagcagacgcagacttagtgacggat
acacaacgaggaacaacccttgaaaagaaaggggttaaggtttgtaccactgaacatatt
ttagctgccctatacggcatgcaggtggataacgccttgataaaaatagataacgaggag
attccgatcatggatggtagcgcagctcagtttgttgaacaaattgaaaagataggtttg
gaggagcaggatgccgatcgtgagttttttgaatttgacgaaaaccaaccatttgaatgc
cttgaaaagggggtagaaatgttggccataccgtatgaagactttagaataacggtaatg
gtggattacaattcagaggttttagggacgcagcacgcttcaatgtatgaaatcggagag
tttcagaaggagatctcaccctgcagaacatttgtgttcttgaaagaattggagttttta
gccaaacaaggactgattaaaggaggtgaggtagacaatgcgattgtccttgttgaacga
gaaaatgtcccacaagaggaaatcgatgccctggctaaattacttggaaaagaggatgag
acctacaaagtgaaaggaagaacccttaacaacattaaactaaagtttatcaatgagccg
gcaagacataaattgctggatattattggtgatctggctcttgttgggaaaccaattaaa
ggtcatattcttgcggcaagacctggtcactctggaaatacctctttcgcgaagatcatc
aagaacttgatgaaggaacaagcaaaaaaagggaagaagtttgaccttgataaagaacca
ttatacaatatcaatgatattgaaagaatgttaccccaccgttatcctttcttgctcgta
gataagatcatggaaataacagatgacggaattgttggggttaagaatattaccatgaac
gaacctcagtttactggacatttcccaggaaacccagttatgccaggagttctgcagatt
gaagcaatggcgcaggttgggggtatattcgcactgagtaaagtagaagacccagagtac
tattctacctatttcatgaaaattgataatgtgaagtttaagcaaaaagtaattccagga
gatacagtggtctttgacttaaaacttttatccccaatgagaagaggtttggtgaacatg
ggaggtacggcctatgtaaacggaaaaccagtgatgcaggctgaaatgctcgcacaagtg
attaaagataaagcctaa
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