KEGG   PATHWAY: ptao03050
Entry
ptao03050                   Pathway                                
Name
Proteasome - Phyllopteryx taeniolatus (common seadragon)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ptao03050  Proteasome
ptao03050

Other DBs
GO: 0000502
Organism
Phyllopteryx taeniolatus (common seadragon) [GN:ptao]
Gene
133465900  [KO:K03036]
133466473  psmd3; 26S proteasome non-ATPase regulatory subunit 3 isoform X1 [KO:K03033]
133467892  psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
133468316  psmc6; 26S proteasome regulatory subunit 10B isoform X1 [KO:K03064]
133468396  psmb6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
133468454  [KO:K02730] [EC:3.4.25.1]
133468503  psmc1b; proteasome 26S subunit, ATPase 1b [KO:K03062]
133468924  psme3; proteasome activator complex subunit 3 [KO:K06698]
133469112  psmd11b; 26S proteasome non-ATPase regulatory subunit 11B [KO:K03036]
133469659  psme4b; proteasome activator complex subunit 4B [KO:K06699]
133469679  psmc5; 26S proteasome regulatory subunit 8 [KO:K03066]
133470216  psme2; proteasome activator complex subunit 2 [KO:K06697]
133470464  pomp; proteasome maturation protein [KO:K11599]
133470501  psme1; proteasome activator complex subunit 1 [KO:K06696]
133470926  [KO:K02741] [EC:3.4.25.1]
133471194  psmb2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
133471282  [KO:K03029]
133471379  sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
133471413  psmb4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
133471618  psma4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
133472297  psmc2; 26S proteasome regulatory subunit 7 [KO:K03061]
133473352  psmd13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
133474332  psmb1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
133474350  [KO:K03065]
133474351  [KO:K03065]
133475317  psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
133476220  psmd12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
133477450  psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
133477622  psmd7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
133477673  adrm1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
133478230  psma1; proteasome subunit alpha type-1 isoform X1 [KO:K02725] [EC:3.4.25.1]
133479525  [KO:K02726] [EC:3.4.25.1]
133479597  psmc4; 26S proteasome regulatory subunit 6B [KO:K03063]
133479832  [KO:K03029]
133480531  psmd1; 26S proteasome non-ATPase regulatory subunit 1 isoform X1 [KO:K03032]
133480760  [KO:K11598] [EC:3.4.25.1]
133481771  psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
133482743  psmd2; 26S proteasome non-ATPase regulatory subunit 2 isoform X1 [KO:K03028]
133483133  psmd6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
133484076  psmf1; proteasome inhibitor PI31 subunit [KO:K06700]
133484098  psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
133485545  psme4a; LOW QUALITY PROTEIN: proteasome activator complex subunit 4A [KO:K06699]
133487590  psma3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
133489131  psma8; proteasome subunit alpha-type 8 [KO:K02731] [EC:3.4.25.1]
133489132  psmb5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
133490376  psmb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
ptao04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   

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