Phyllopteryx taeniolatus (common seadragon): 133465493
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Entry
133465493 CDS
T09737
Symbol
col1a1a
Name
(RefSeq) collagen, type I, alpha 1a
KO
K06236
collagen type I alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04510
Focal adhesion
ptao04512
ECM-receptor interaction
ptao04518
Integrin signaling
ptao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133465493 (col1a1a)
04518 Integrin signaling
133465493 (col1a1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133465493 (col1a1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133465493 (col1a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133465493 (col1a1a)
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133465493 (col1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
SNARE
Motif
Other DBs
NCBI-GeneID:
133465493
NCBI-ProteinID:
XP_061604358
LinkDB
All DBs
Position
16:complement(6101961..6117584)
Genome browser
AA seq
1448 aa
AA seq
DB search
MFSFVDLRLALLLSAAVLLVRAQAEDDLASGSCTLDGQVFADRDVWKPEPCQICVCDSGT
VMCDEVICEDTTDCPNPVIPHDECCPICPDDGYQGQSQVEGPKGDRGPKGERGPVGPSGN
DGIPGQPGLPGPPGPPGPPGLGGNFSPQMSSGYEDKSPVMPVPGPMGPMGPRGAPGSPGA
SGPQGFTGPPGESGEAGPAGAMGQRGPAGPTGKNGEDGESGKPGRGGERGPAGAQGARGF
PGTPGLPGIKGHRGFSGLDGAKGDSGPAGPKGETGNAGENGTPGAMGPRGLPGERGRAGP
AGAAGARGNDGAAGAAGPPGSTGPAGPPGFPGGPGAKGESGAQGSRGPEGPGGARGEPGN
PGPAGAAGASGNPGADGVAGAKGLPGAAGVAGAPGFPGPRGPSGPQGAAGAPGPKGNTGE
AGGPGSKGEPGAKGEAGAPGVAGPSGSSGEEGKRGSRGEPGPVGVRGVPGERGGTGGRGF
PGADGASGPKGATGERGAPGVAGPKGSTGESGRTGEAGLPGAKGMTGSPGSPGPDGKMGA
TGAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGDAGKSGERGVMGPTGPVGAAGKDGE
VGAQGPAGANGPAGERGEQGPAGPPGFQGLPGPQGAIGETGKSGEQGVPGEAGVTGVAGS
RGDRGFPGERGAPGAIGPNGARGSPGSAGNEGSKGDAGAPGSPGAQGPPGLQGMPGERGA
GGLPGLRGDRGEQGLKGTDGAPGKDGPRGMGGAIGLPGPAGATGDKGESGPAGPVGSAGA
RGGPGERGEAGPPGPAGFAGPPGADGLIGAKGEAGNNGAKGDAGAPGPSGPTGAPGPQGP
VGNTGPKGGRGPAGSPGATGFPGAAGRVGPPGPSGNAGPPGPSGPGGKEGPKGNRGDTGP
AGRPGEVGAAGVPGPAGEKGSPGADGAPGSAGISGPQGISGQRGIVGLSGMRGERGFPGL
PGPSGESGKQGAAGPAGERGPPGPMGPPGLAGPAGETGREGSPGNEGSAGRDGSAGPKGV
RGESGPAGAPGAPGSPGAPGPVGPAGKNGDRGETGAAGPAGPAGPAGSRGPAGAAGLRGD
KGENGETGERGLKGHRGFSGMQGAPGPTGHAGEPGPAGVAGPAGPRGASGAAGSHGKDGM
TGLPGPSGPPGPRGRSGEMGPSGPPGPPGAPGAPGAPGGGFDLGFLAQPQEKAPDPFRMY
RADDANVLRDRDLEVDSTLKTLSQQIEQIRSPDGSRKNPARTCRDLKMCHPDWKSGEYWI
DPDQGCTQDAIKVYCNMETGETCVSPTQREVAMKNWYVSKNIKEKKHVWFGEAMNEGFQF
EYGSEGSLPEDVNIQMTFLRLMSTEASQNITYHCKNSISYMDAATGNLKKAVILQGSNEI
EIRAEGNSRFTYSVLEDGCTSHTGTWGKTVIEYKTSKTSRLPIIDIAPMDVGAPDQEFGL
EVGPVCFL
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggatttgcggctggcgctgctgctcagcgcagcggtgcttctggtg
agagcacaggccgaggacgacctcgcgagcggaagctgcaccctagacggccaggtgttt
gcggaccgtgatgtctggaaacccgagccgtgccagatctgcgtgtgcgacagcggcacc
gtgatgtgcgatgaggtcatctgcgaggacacaaccgactgccccaaccccgtcatcccc
catgacgagtgctgccccatctgccccgacgacggctaccagggtcaatctcaggtcgag
ggacccaagggagaccgtggacctaaaggagagaggggtcccgtcggtccttctggtaac
gatggtatccccggccagcccggtctgcctggacctcccggcccccctggaccccctggc
ctcggtggaaacttctcccctcaaatgtctagcggttatgaggacaagtctcctgtcatg
cctgttcctggacccatgggcccaatgggacctcgtggagcccctggatctcctggtgct
agcggccctcagggattcaccggtccccctggtgagtctggagaggccggacctgctgga
gccatgggacagcgcggacccgccggccccactggcaagaacggagaggacggtgaatct
ggcaagccgggtcgtggtggtgagcgcggacccgccggcgctcagggagctcgcggtttc
cccggaacccccggtctgcccggcatcaagggacacagaggattcagtggtctggatggt
gccaagggagactctggccctgctggacctaagggagagactggaaatgctggtgagaac
ggaactcctggtgctatgggaccccgcggtctgcctggtgagagaggtcgcgctggccct
gctggagctgctggtgctcgtggtaacgacggtgccgccggtgctgccggacctcccggt
tccactggccccgctggacctcctggattccccggtggccctggagccaagggtgagtct
ggagctcagggttctcgtggacccgagggccccggtggagcccgtggtgagcccggtaat
cctggacccgctggtgctgccggagcttctggtaaccctggagctgatggagttgctgga
gctaagggactccctggtgctgctggagttgctggagctcccggattccccggaccccgt
ggaccctcaggaccccaaggtgctgctggtgcccccggacccaagggtaacactggtgag
gccggtggccccggaagcaagggagagcctggtgccaagggagaggctggtgcacctgga
gttgcaggaccttcaggatcttctggtgaggagggcaagagaggatccagaggagagccc
ggtcccgttggagtccgtggagttcctggcgagcgcggtggaactggcggtcgtggtttc
cctggtgctgatggcgcttctggacccaaaggtgccactggtgagcgcggtgcccctggt
gttgctggacctaaaggttccactggtgagtccggccgcactggtgaggctggtttgccc
ggagctaagggtatgactggcagccctggcagccctggacccgatggcaagatgggagct
actggtgcccctggacaagatggccgccctggaccccctggctcagttggagccagaggc
cagcctggtgtcatgggattccccggacctaagggagccgctggcgatgctggaaagtcc
ggtgagagaggagtgatgggacctactggccctgttggtgccgctggaaaggacggtgag
gttggcgctcagggacctgccggagctaacggacctgctggtgagagaggtgagcaagga
cctgccggacctccaggattccagggacttccaggaccccagggtgccattggtgagact
ggcaagtccggagagcagggtgtgcccggagaggctggagtcacaggagttgctggttct
agaggcgacagaggtttccccggtgagcgtggtgcccctggtgccatcggacctaatggt
gcccgtggatcccctggatctgctggaaacgagggttctaagggagatgctggagcacct
ggttcccccggagctcagggcccacctggactgcagggaatgcctggtgagcgtggtgcc
ggcggtcttccaggactgagaggagatagaggtgagcaaggacttaagggcactgatgga
gctcctggcaaagatggtcctcgtggtatgggtggcgctattggacttcccggacctgct
ggagccaccggagacaagggagagagtggccccgctggacctgttggatctgctggagcc
cgtggaggccctggtgagcgtggagaggcaggaccacctggacctgctggatttgctgga
cctcctggtgctgatggtcttattggtgctaagggagaggctggtaacaatggtgctaag
ggtgatgctggtgctcctggtccttctggacccactggtgcccctggaccccagggtccc
gttggaaacactggccccaagggaggtcgcggacctgctggatctcctggtgctactggc
ttccctggtgctgctggcagagttggaccacctggcccctctggcaatgctggacctcct
gggccttctggacccggtggaaaggaaggacccaaaggaaaccgcggtgacaccggacct
gctggtcgccctggtgaagttggagctgcaggagtccctggtcctgctggtgagaagggt
agccctggtgccgatggtgctcctggtagtgctggtatttctggacctcagggtatcagt
ggacagcgtggtattgtcggtctgtctggaatgagaggagagagaggtttccccggcctg
cctggaccttctggagagtccggaaagcagggagctgctggccccgctggtgagcgtgga
cctcctggaccaatgggaccccctggactggctggacccgctggagagaccggacgtgag
ggttcccctggtaatgagggatctgctggccgtgatggatctgctggacccaagggagtc
cgtggagagtctgggcctgctggagctcctggtgcccccggatcccctggtgcccctgga
cccgtcggacctgctggaaagaacggtgaccgtggagagactggagctgctggccctgct
ggccctgctggtcctgctggatctcgtggccccgctggagccgctggacttcgtggagac
aagggagagaacggtgagactggtgagagaggcttgaagggacacagaggattcagtggc
atgcagggagctcctggacccaccggtcatgctggagagccaggacctgctggtgttgct
ggacccgctggacctagaggagcttctggagctgctggttctcatggtaaggatggtatg
actggccttcctggtcccagtggacctcctggacctcgtggacgctctggcgagatggga
ccttctggtcctcccggacctcccggagctcccggagcaccaggcgcccctggtggcgga
tttgacctcggtttccttgcccagccccaggagaaggctcccgatcccttccgtatgtac
cgcgctgatgacgctaacgttctgcgtgaccgcgacctggaggtggacagcactctgaag
accctgagccagcagattgagcagatccgcagccccgacggaagtcgcaagaaccctgcc
agaacctgccgcgacctcaagatgtgccacccagactggaagagcggagagtactggatt
gaccctgaccagggctgcactcaggatgccatcaaggtctactgcaacatggagaccgga
gagacctgtgtgtccccgactcagcgtgaggttgccatgaagaactggtacgtcagcaag
aacatcaaggagaagaagcacgtctggtttggcgaggcaatgaacgagggcttccagttc
gagtacggcagcgagggctctctgccagaagatgtcaacatccagatgaccttcctgcgt
ctcatgtcaactgaggcttcccagaacatcacataccactgcaagaacagcatctcctac
atggatgctgccactggcaacctgaagaaggctgtgatcctccagggctccaacgagatt
gagatcagagctgagggcaacagccgcttcacctacagtgtcctcgaggatggctgcacg
tcacacaccggtacatggggcaagacagtcattgagtacaagacatcgaaaacatctcgc
ctgcccatcattgacatcgctcctatggatgttggtgctccagaccaagagtttggcctt
gaagttggacctgtctgtttcttgtaa
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