Phyllopteryx taeniolatus (common seadragon): 133465733
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Entry
133465733 CDS
T09737
Symbol
casc3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03013
Nucleocytoplasmic transport
ptao03015
mRNA surveillance pathway
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133465733 (casc3)
09122 Translation
03013 Nucleocytoplasmic transport
133465733 (casc3)
03015 mRNA surveillance pathway
133465733 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133465733 (casc3)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133465733 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
133465733
NCBI-ProteinID:
XP_061604773
LinkDB
All DBs
Position
16:complement(23345839..23353843)
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AA seq
694 aa
AA seq
DB search
MADRRRRRRRASQDSDDDDDDESGSSSGSEIRESGSQTSKGRGGREPEPAEVASERIEAK
EEVASECESEDGAGEAVLSDYDSADPEENASHSEGGEEEEGADGFSDKEAPAAASQSKLS
APAQPAPAEANEDREERSKVEKESEEKGKSAGERQSGDGQESTEDPETKAGGQSGQQLDD
DEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEEQAPKSR
EELIASYGYDIRNGERTFVHRRPRSSVSPNREPWWRDGGERAVRSWQSGRGGRGGGSLAR
GGPPHRAVPLVASQRGNTTRGRPPHLPAQPQYGGSDSHAPLLHPRERVGPKAPPVPAAAG
RGSRRAAEDPPVSKDGEDDRPLSTGTQVAYRSTSPTQQLQEKRGGAAQPPHASVASQEAS
PPAERPVERKSYSLARRSRSRPAELGGKQTSVEEVAVAEVKNPVGGGGMAELDQDVARLS
LVSGQSWNQNPASYVHSEIRSLRGGLPIPSGRPPFSGLDEMSGGSNRAKRYSSQRQRGVA
EAAPLHIGVMEGHYYEPMTYQGPIFTHGEASAPVAPQGILVQPEMHIPHPGLHPHQSGGP
IANPALYGGPPVSLPPGQPQQLLPPPFYPPPGVMTFPYPAMYPSPQGQSQVTYGGVTYYD
TMQQQAQPKPSPPRRTSQPVTVKPPPPEVPFALE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcggaggaggcgcgcgtcccaggacagcgatgacgatgacgac
gacgagtccggttcctcttcgggctcggagatccgcgaatcaggctcccagacgagcaag
ggccgcggcggcagagagcctgaaccggcagaggtcgcttcggagcggatcgaggccaag
gaggaagtggcgtccgagtgtgagagcgaagatggagctggagaagctgtcctctcggac
tacgacagcgccgatccggaagaaaacgcctcccactcggagggaggagaggaggaggag
ggcgcggatggattcagcgataaagaagctccggcagcggccagccagtccaaactttcc
gctccggcccaaccggcgccagcagaggccaatgaagacagggaagagcggagtaaagtg
gagaaggagtcagaggaaaaaggaaagtcggcaggagagcggcagagcggcgacggtcag
gagtccaccgaggaccctgaaaccaaagcgggagggcagtccgggcagcagctggacgac
gacgaggaccgcaaaaacccggcttacatccctcgtaagggtctcttcttcgagcacgac
gtcagaggccacgcccaggaggaggaaaggcccaaaggcagaaacaggaagctgtggaag
gatgaagggcgctgggagcacgacaagttccgcgaggaggagcaagcgcccaagagccgt
gaggagctcatcgccagctacggttacgacatccggaacggcgagcgcacttttgtccat
cgccggcctcggtcgtctgtgtcccccaacagggagccgtggtggcgggacgggggggag
cgagcggtgcgctcttggcagagcggtcgaggaggaagaggaggagggagtcttgcccga
ggcggtcctccccatcgtgctgtcccacttgtggccagccagcgtggtaacaccacccgc
ggccgaccaccccacctcccggcgcagccccagtacggggggagcgactcgcacgcgcct
ctgcttcatccgcgagaaagagtaggtcctaaagccccgcccgtgccggcggcggccggc
aggggaagccgtagggccgcggaggacccgccagtcagcaaagatggcgaagacgaccgc
ccgctgagtaccggaacccaggtggcatatcggagcacgtcgcctacgcaacagctgcag
gaaaaacgagggggtgccgctcaacccccccatgcgtccgtggcctcccaggaagcctct
cctcccgccgaacggcccgttgagcgaaagtcgtactcgctggcccgcaggagtcgctcc
cggccggccgagctgggcggcaaacagacgtccgtggaggaggtagcggtggcggaagtg
aagaacccggtggggggcggaggcatggccgagctggaccaggacgtggcccgactgagt
ctggtgtctggacagagctggaaccagaaccctgcttcctacgtacactctgagatcaga
agcttgagaggcggcttgcccatcccgtccggtcggcctccgttctcaggtttggacgag
atgtcaggcggctccaaccgcgccaagcgttactcctcccagcggcaaagaggtgtggcc
gaggcggcccccctgcacatcggcgtcatggagggacactactacgaacccatgacgtac
cagggaccaattttcacgcatggcgaagcctcggcccccgtcgcaccccaaggcatactg
gtccaacccgagatgcacatcccccatcctggactacatccccaccagtcgggaggcccc
atagcaaaccccgccctctacggagggccgcctgtatctctgccaccagggcaaccgcaa
caacttttgccgccgcctttctatcctccgccaggggtcatgaccttcccttacccagcc
atgtacccgagccctcagggtcaatcccaggtgacgtacgggggcgtgacctattacgac
acgatgcaacagcaggctcagcccaaaccttcgccgccccgccgcacgtcccaacccgtt
actgtcaagccccctcctcccgaagtgccctttgcattggagtga
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